RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 UGT2B10P36537 528 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 ZNF41P51814 821 aaPredicted RBP11.94□□□□□ -0.5
APOC1-209ENST00000592885 CLDN20P56880 219 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 SIRPAP78324 504 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 RFTN2Q52LD8 501 aaPredicted RBP11.94□□□□□ -0.5
APOC1-209ENST00000592885 EXOSC6Q5RKV6 272 aaKnown RBP11.94□□□□□ -0.5
APOC1-209ENST00000592885 ANKRD26P1Q6NSI1 321 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 ZNF474Q6S9Z5 364 aaPredicted RBP11.94□□□□□ -0.5
APOC1-209ENST00000592885 APOOLQ6UXV4 268 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 FAM214BQ7L5A3 538 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 SZRD1Q7Z422 152 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 BTLAQ7Z6A9 289 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 WDR75Q8IWA0 830 aaKnown RBP11.94□□□□□ -0.5
APOC1-209ENST00000592885 DDIASQ8IXT1 998 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 BANPQ8N9N5 519 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 FNDC9Q8TBE3 224 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 TWIST2Q8WVJ9 160 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 SLC9A6Q92581 669 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 TRIM44Q96DX7 344 aaPredicted RBP11.94□□□□□ -0.5
APOC1-209ENST00000592885 FAM111AQ96PZ2 611 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 STACQ99469 402 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 PIP5K1AQ99755 562 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 MED18Q9BUE0 208 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 L2HGDHQ9H9P8 463 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 UBQLN4Q9NRR5 601 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 DUSP22Q9NRW4 184 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 SH3BP4Q9P0V3 963 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 ATP6V1HQ9UI12 483 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 PROCRQ9UNN8 238 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 EMC9Q9Y3B6 208 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 FIS1Q9Y3D6 152 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 NF1P21359 2839 aa11.94□□□□□ -0.5
APOC1-209ENST00000592885 H0YC42 278 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 C16orf97H3BN30 126 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 SCDO00767 359 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 SCAMP2O15127 329 aaKnown RBP11.93□□□□□ -0.5
APOC1-209ENST00000592885 KRT16P08779 473 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 ALOX5P09917 674 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 LINC00032P0C843 101 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 BCKDHAP12694 445 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 HPGDP15428 266 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 HOXC12P31275 282 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 CCKARP32238 428 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 PRKAG1P54619 331 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 TPD52P55327 224 aaPredicted RBP11.93□□□□□ -0.5
APOC1-209ENST00000592885 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 POU4F3Q15319 338 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 SGCBQ16585 318 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 DUSP5Q16690 384 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 GALNTL6Q49A17 601 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 XKR7Q5GH72 579 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 SHEQ5VZ18 495 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 MTERF4Q7Z6M4 381 aaKnown RBP11.93□□□□□ -0.5
APOC1-209ENST00000592885 TRABD2AQ86V40 505 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 LRRC75A-AS1Q8N1F1 130 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 COX18Q8N8Q8 333 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 SLC16A11Q8NCK7 471 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 LRRN4CLQ8ND94 238 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 OR5M1Q8NGP8 315 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 OR6K3Q8NGY3 331 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 FAM120BQ96EK7 910 aaKnown RBP11.93□□□□□ -0.5
APOC1-209ENST00000592885 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 GMPPAQ96IJ6 420 aaPredicted RBP11.93□□□□□ -0.5
APOC1-209ENST00000592885 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
APOC1-209ENST00000592885 FANCFQ9NPI8 374 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 GLRX2Q9NS18 164 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 ATAD3AQ9NVI7 634 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 LGALS13Q9UHV8 139 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 MCTS1Q9ULC4 181 aaKnown RBP11.93□□□□□ -0.5
APOC1-209ENST00000592885 VDAC3Q9Y277 283 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 TRAF6Q9Y4K3 522 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 PCNX3Q9H6A9 2034 aa11.93□□□□□ -0.5
APOC1-209ENST00000592885 UQCRHLA0A096LP55 91 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 A0A1W2PPR1 153 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 A0A1W2PRB8 838 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 DEFB108AA8MXU0 73 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 EIF1AYO14602 144 aaKnown RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 PIP5K1BO14986 540 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 SS18L1O75177 396 aaPredicted RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 LYPLA1O75608 230 aaPredicted RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 CHRNGP07510 517 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 PPP3CBP16298 524 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 IL11P20809 199 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 FPR1P21462 350 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ME2P23368 584 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ELK4P28324 431 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ALDH3A1P30838 453 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 EIF1P41567 113 aaKnown RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 EIF1AXP47813 144 aaKnown RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 KCNJ5P48544 419 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 RAC1P63000 192 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 POU6F2P78424 691 aaPredicted RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 PLPPR5Q32ZL2 321 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 UGT3A2Q3SY77 523 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ATP6AP1LQ52LC2 224 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ARL13AQ5H913 290 aaPredicted RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 PDSS1Q5T2R2 415 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ESPNLQ6ZVH7 1005 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 BIVMQ86UB2 503 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms