RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 CLECL1Q8IZS7 167 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 ANKRD42Q8N9B4 389 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 SFXN5Q8TD22 340 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 PRPF18Q99633 342 aaKnown RBP18.22■□□□□ 0.51
CIRBP-239ENST00000592467 BTBD2Q9BX70 525 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 NUF2Q9BZD4 464 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 SERHL2Q9H4I8 314 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 MEAF6Q9HAF1 191 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 SNX8Q9Y5X2 465 aa18.22■□□□□ 0.51
CIRBP-239ENST00000592467 HRNRQ86YZ3 2850 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-239ENST00000592467 SNNO75324 88 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-239ENST00000592467 TGM6O95932 706 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 TMIGD3P0DMS9 266 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-239ENST00000592467 POU6F2P78424 691 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-239ENST00000592467 CD226Q15762 336 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 LSM12Q3MHD2 195 aaKnown RBP18.21■□□□□ 0.51
CIRBP-239ENST00000592467 OR4F3Q6IEY1 312 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 COX18Q8N8Q8 333 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 OR8J2Q8NGG1 315 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 OR56A1Q8NGH5 318 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 RNASE6Q93091 150 aaKnown RBP18.21■□□□□ 0.51
CIRBP-239ENST00000592467 ACTRT3Q9BYD9 372 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 PTGES2Q9H7Z7 377 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 TMBIM4Q9HC24 238 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 NEUROD4Q9HD90 331 aa18.21■□□□□ 0.51
CIRBP-239ENST00000592467 ANKHD1Q8IWZ3 2542 aaKnown RBP18.2■□□□□ 0.5
CIRBP-239ENST00000592467 A0A1W2PQD3 144 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 SHISA8B8ZZ34 492 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 SDHDO14521 159 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 PEPDP12955 493 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 TP53BP2Q13625 1128 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 RAET1LQ5VY80 246 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 OGFOD2Q6N063 350 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 GATSQ8NAP1 163 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 OR5AK3PQ8NH89 298 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 JADE3Q92613 823 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 ZFP3Q96NJ6 502 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 TM9SF2Q99805 663 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 UBQLN4Q9NRR5 601 aa18.2■□□□□ 0.5
CIRBP-239ENST00000592467 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 FAM221AA4D161 298 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 NPIPB9F8W1W9 429 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 RNASET2O00584 256 aaKnown RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 NDUFB5O43674 189 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 TNFSF13O75888 250 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 ALDOCP09972 364 aaKnown RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 POU3F2P20265 443 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 CAPN3P20807 821 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 PSMA4P25789 261 aaKnown RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 OPRM1P35372 400 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 DGKQP52824 942 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 CLDN20P56880 219 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 MAGOHP61326 146 aaKnown RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 PGS1Q32NB8 556 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 HHATQ5VTY9 493 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 GGNQ86UU5 652 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 KIRREL3Q8IZU9 778 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 CLEC4FQ8N1N0 589 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 GOT1L1Q8NHS2 421 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 TESCQ96BS2 214 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 MOAP1Q96BY2 351 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 TEX37Q96LM6 180 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 OR7D2Q96RA2 312 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 PAIP2Q9BPZ3 127 aaKnown RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 ZNF559Q9BR84 538 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 PIGQQ9BRB3 760 aa18.19■□□□□ 0.5
CIRBP-239ENST00000592467 ANKRD17O75179 2603 aaKnown RBP18.19■□□□□ 0.5
CIRBP-239ENST00000592467 ENO4A6NNW6 628 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 LINC01387J3KSC0 135 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 OIP5O43482 229 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 GMFGO60234 142 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 LBPP18428 481 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 UQCRC1P31930 480 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 KLHL26Q53HC5 615 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 DCST2Q5T1A1 773 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 UBQLNLQ8IYU4 475 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 GCNT2Q8N0V5 402 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 OR5D16Q8NGK9 328 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 ADAMTS15Q8TE58 950 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 FIG4Q92562 907 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 INTS12Q96CB8 462 aaKnown RBP18.18■□□□□ 0.5
CIRBP-239ENST00000592467 SFXN3Q9BWM7 321 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 SLC24A3Q9HC58 644 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 CRIM1Q9NZV1 1036 aa18.18■□□□□ 0.5
CIRBP-239ENST00000592467 CELSR1Q9NYQ6 3014 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 NPIPA5A0A0B4J1W7 369 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 C7orf72A4D263 438 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 NPIPA7E9PJI5 369 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 H3BML4 177 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 TNFRSF21O75509 655 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 NPIPA8P0DM63 369 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 ZNF17P17021 662 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 RPS26P62854 115 aaKnown RBP18.17■□□□□ 0.5
CIRBP-239ENST00000592467 OCRLQ01968 901 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 PLPPR5Q32ZL2 321 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 SPDYE7PQ495Y7 208 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 GRAMD2AQ8IUY3 354 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 METTL25Q8N6Q8 603 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 POC1BQ8TC44 478 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms