RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 C3orf38Q5JPI3 329 aa18.29■□□□□ 0.52
MBD3-209ENST00000592012 TCTN2Q96GX1 697 aa18.29■□□□□ 0.52
MBD3-209ENST00000592012 UBE2ZQ9H832 354 aaPredicted RBP18.29■□□□□ 0.52
MBD3-209ENST00000592012 CARD8Q9Y2G2 431 aa18.29■□□□□ 0.52
MBD3-209ENST00000592012 TGFBR3LH3BV60 316 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 KCNK2O95069 426 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 LYPD3O95274 346 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 MAOBP27338 520 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 CRYBB2P43320 205 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.28■□□□□ 0.52
MBD3-209ENST00000592012 DRAXINQ8NBI3 349 aaPredicted RBP18.28■□□□□ 0.52
MBD3-209ENST00000592012 LMX1AQ8TE12 382 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 MROQ9BYG7 248 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 CHRDQ9H2X0 955 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 POLE3Q9NRF9 147 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 NDUFB11Q9NX14 153 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 HCN3Q9P1Z3 774 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 ABCA7Q8IZY2 2146 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 PCDH15Q96QU1 1955 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 FMO6PO60774 539 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 APOL3O95236 402 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 PROS1P07225 676 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 RNH1P13489 461 aaKnown RBP18.28■□□□□ 0.52
MBD3-209ENST00000592012 PSMA1P25786 263 aaKnown RBP18.28■□□□□ 0.52
MBD3-209ENST00000592012 ZNF155Q12901 538 aaPredicted RBP18.28■□□□□ 0.52
MBD3-209ENST00000592012 SLC13A2Q13183 592 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 OXA1LQ15070 435 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 PERM1Q5SV97 790 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 GDPGP1Q6ZNW5 385 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 PHC2Q8IXK0 858 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 UCK1Q9HA47 277 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 CAPN10Q9HC96 672 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 IL20RAQ9UHF4 553 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 ZNF223Q9UK11 482 aaPredicted RBP18.28■□□□□ 0.52
MBD3-209ENST00000592012 CDH10Q9Y6N8 788 aa18.28■□□□□ 0.52
MBD3-209ENST00000592012 WWP2O00308 870 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 KPNA4O00629 521 aaPredicted RBP18.27■□□□□ 0.52
MBD3-209ENST00000592012 COQ9O75208 318 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 CD40LGP29965 261 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 EMDP50402 254 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 FLYWCH1Q4VC44 716 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 AADACL4Q5VUY2 407 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 ZC3H14Q6PJT7 736 aaKnown RBP18.27■□□□□ 0.52
MBD3-209ENST00000592012 GKN2Q86XP6 184 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 RNF113BQ8IZP6 322 aaKnown RBP18.27■□□□□ 0.52
MBD3-209ENST00000592012 CLDN22Q8N7P3 220 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 RIT1Q92963 219 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 RBM18Q96H35 190 aaKnown RBP18.27■□□□□ 0.52
MBD3-209ENST00000592012 PEX11GQ96HA9 241 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 KRCC1Q9NPI7 259 aaPredicted RBP18.27■□□□□ 0.52
MBD3-209ENST00000592012 SEC14L4Q9UDX3 406 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 CFL2Q9Y281 166 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 IRGMA1A4Y4 181 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 CTNSO60931 367 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 SOX30O94993 753 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 MYL12AP19105 171 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 PGGHGQ32M88 737 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 LIPKQ5VXJ0 399 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 SLC38A3Q99624 504 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 LMF2Q9BU23 707 aaKnown RBP18.27■□□□□ 0.52
MBD3-209ENST00000592012 CNPPD1Q9BV87 410 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 TEX12Q9BXU0 123 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 MED17Q9NVC6 651 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 DOLKQ9UPQ8 538 aa18.27■□□□□ 0.52
MBD3-209ENST00000592012 HRKO00198 91 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 TAF4O00268 1085 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 CDC123O75794 336 aaPredicted RBP18.26■□□□□ 0.51
MBD3-209ENST00000592012 DRD5P21918 477 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 MAT1AQ00266 395 aaKnown RBP18.26■□□□□ 0.51
MBD3-209ENST00000592012 STX4Q12846 297 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 FAM53BQ14153 422 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 OR2T33Q8NG76 320 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 TMEM239Q8WW34 195 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 PPP1R14BQ96C90 147 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 TRMT61AQ96FX7 289 aaKnown RBP18.26■□□□□ 0.51
MBD3-209ENST00000592012 SAMD8Q96LT4 415 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 FOLH1BQ9HBA9 442 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 EXOSC4Q9NPD3 245 aaKnown RBP18.26■□□□□ 0.51
MBD3-209ENST00000592012 C20orf141Q9NUB4 165 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 QPCTLQ9NXS2 382 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 STUB1Q9UNE7 303 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 CLDN16Q9Y5I7 305 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 LILRA5A6NI73 299 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 HRO43593 1189 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 SOX6P35712 828 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 GABRA4P48169 554 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 SKP1P63208 163 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 ERV3-1Q14264 604 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 TRIM16LQ309B1 348 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 TUBA3EQ6PEY2 450 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 C17orf82Q86X59 251 aaPredicted RBP18.26■□□□□ 0.51
MBD3-209ENST00000592012 OR4N2Q8NGD1 307 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 PFN4Q8NHR9 129 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 ZNF285Q96NJ3 590 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.26■□□□□ 0.51
MBD3-209ENST00000592012 DPH1Q9BZG8 443 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 SIDT1Q9NXL6 827 aaKnown RBP18.26■□□□□ 0.51
MBD3-209ENST00000592012 DAPK2Q9UIK4 370 aa18.26■□□□□ 0.51
MBD3-209ENST00000592012 TMEM129A0AVI4 362 aa18.25■□□□□ 0.51
MBD3-209ENST00000592012 ZGLP1P0C6A0 271 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms