RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TREM2Q9NZC2 230 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 NTMQ9P121 344 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 PRODH2Q9UF12 536 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 ZDHHC2Q9UIJ5 367 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 VWA7Q9Y334 891 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 OARD1Q9Y530 152 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 PCDHB14Q9Y5E9 798 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 MMP24Q9Y5R2 645 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
DNMT1-222ENST00000590619 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 NPEPPSL1A6NEC2 478 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 DNAJC9-AS1A6NH13 148 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 NCF1BA6NI72 391 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 NCF1CA8MVU1 366 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 B9A039 149 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 ATP6V1G2-DDX39BF2Z307 99 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 EFNA2O43921 213 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 RAD51DO75771 328 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 PRSS23O95084 383 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 IL33O95760 270 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 GBAP04062 536 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 RNASE1P07998 156 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 IGFBP1P08833 259 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 NCF1P14598 390 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 DDX5P17844 614 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 ENPP1P22413 925 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 COL8A2P25067 703 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 SHC1P29353 583 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 FEN1P39748 380 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 RAP1GDS1P52306 607 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 TERF1P54274 439 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 MANFP55145 182 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 LOXL3P58215 753 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 CDK16Q00536 496 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 IRF8Q02556 426 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 RASGEF1BQ0VAM2 473 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 STX5Q13190 355 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 TBCCQ15814 346 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 ZNF239Q16600 458 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 TSNAXIP1Q2TAA8 658 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 PAGE2BQ5JRK9 111 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 PDSS1Q5T2R2 415 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 KPRPQ5T749 579 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 CPTPQ5TA50 214 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 ARMC3Q5W041 872 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 OR52E8Q6IFG1 317 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 MED27Q6P2C8 311 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 APOOLQ6UXV4 268 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 NPSR1Q6W5P4 371 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 RBMS3Q6XE24 437 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 FCRLAQ7L513 359 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 DOK3Q7L591 496 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 SPATA19Q7Z5L4 167 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 NKAPQ8N5F7 415 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 OR51F2Q8NH61 342 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 POC1BQ8TC44 478 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 MRAPQ8TCY5 172 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 ZNF75CPQ92670 426 aaPredicted RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 REXO5Q96IC2 774 aaKnown RBP5.6□□□□□ -1.51
DNMT1-222ENST00000590619 DOK1Q99704 481 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 TMEM79Q9BSE2 394 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 TSPY26PQ9H489 355 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 TMEM185BQ9H7F4 350 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 CXorf36Q9H7Y0 433 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 PRM3Q9NNZ6 103 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 SLC52A3Q9NQ40 469 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 LMBRD1Q9NUN5 540 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 MCM8Q9UJA3 840 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 CES1P1Q9UKY3 287 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 VDAC3Q9Y277 283 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 TRAF6Q9Y4K3 522 aa5.6□□□□□ -1.51
DNMT1-222ENST00000590619 IGLV3-32A0A0A0MS00 114 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 TMEM129A0AVI4 362 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 CIB4A0PJX0 185 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 TIMM23O14925 209 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 STK16O75716 305 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 KNG1P01042 644 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 FSHBP01225 129 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 ATP1B1P05026 303 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 CCDC175P0C221 793 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 OR4A8P0C604 315 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 PCSK2P16519 638 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 PTX3P26022 381 aaPredicted RBP5.59□□□□□ -1.51
DNMT1-222ENST00000590619 IL12BP29460 328 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 KRT20P35900 424 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 HSPA7P48741 367 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 PPOXP50336 477 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 ARFIP1P53367 373 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 FOXG1P55316 489 aaPredicted RBP5.59□□□□□ -1.51
DNMT1-222ENST00000590619 MRPS35P82673 323 aaKnown RBP5.59□□□□□ -1.51
DNMT1-222ENST00000590619 SARNPP82979 210 aaKnown RBP5.59□□□□□ -1.51
DNMT1-222ENST00000590619 MYBPC1Q00872 1141 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 C17orf67Q0P5P2 114 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 CSTF3Q12996 717 aaKnown RBP5.59□□□□□ -1.51
DNMT1-222ENST00000590619 BAMBIQ13145 260 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 SLC9A3R2Q15599 337 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 LTB4RQ15722 352 aa5.59□□□□□ -1.51
DNMT1-222ENST00000590619 EFNB3Q15768 340 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms