RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 PDZK1Q5T2W1 519 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 AP1ARQ63HQ0 302 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 OR5M10Q6IEU7 315 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 ZNF614Q8N883 585 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 OR10A6Q8NH74 314 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 DUSP19Q8WTR2 217 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 PMM1Q92871 262 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 GNRHR2Q96P88 292 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 ECSITQ9BQ95 431 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 GPATCH1Q9BRR8 931 aaKnown RBP17.48■□□□□ 0.39
DDX39A-214ENST00000590556 TMEM38AQ9H6F2 299 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 RUBCNLQ9H714 662 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 HHATLQ9HCP6 504 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 DTNAQ9Y4J8 743 aa17.48■□□□□ 0.39
DDX39A-214ENST00000590556 C15orf38-AP3S2A0A0A6YYH1 394 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 A0A0G2JPF8 293 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 HNRNPCL2B2RXH8 293 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 HNRNPCL3B7ZW38 293 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 ADAM10O14672 748 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 HNRNPCL1O60812 293 aaKnown RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 UGT2B17O75795 530 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 RFPL3SP0C7P2 107 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 HNRNPCL4P0DMR1 293 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 ESRRAP11474 423 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 RNF144AP50876 292 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 MNAT1P51948 309 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 CDK6Q00534 326 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 C17orf67Q0P5P2 114 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 ADRM1Q16186 407 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 ZNF630Q2M218 657 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 PRAMEF8Q5VWM4 474 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 PRAMEF7Q5VXH5 474 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 ZNF324BQ6AW86 544 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 TRPM8Q7Z2W7 1104 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 ARPINQ7Z6K5 226 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 SERPINA11Q86U17 422 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 PLCZ1Q86YW0 608 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 TMEM251Q8N6I4 163 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 METTL25Q8N6Q8 603 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 WDSUB1Q8N9V3 476 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 GATSQ8NAP1 163 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 NFKBIDQ8NI38 313 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 NR4A3Q92570 626 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 ZG16BQ96DA0 208 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 NSL1Q96IY1 281 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 BARD1Q99728 777 aaKnown RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 TREX2Q9BQ50 279 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 TSPAN10Q9H1Z9 355 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-214ENST00000590556 KCNE5Q9UJ90 142 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 C15orf41Q9Y2V0 281 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 L3MBTL1Q9Y468 752 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 SVILO95425 2214 aa17.47■□□□□ 0.39
DDX39A-214ENST00000590556 SMG1Q96Q15 3661 aaKnown RBP17.46■□□□□ 0.39
DDX39A-214ENST00000590556 SERINC4A6NH21 518 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 C17orf51A8MQB3 221 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 NPIPA5E9PKD4 350 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 CBR3O75828 277 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 CBX6O95503 412 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 MST1P26927 711 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 GDF1P27539 372 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 MAGEA5P43359 124 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 RBBP4Q09028 425 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 SCARB2Q14108 478 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 MAPK14Q16539 360 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 RPS26P11Q5JNZ5 115 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-214ENST00000590556 REEP3Q6NUK4 255 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 C8orf82Q6P1X6 216 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-214ENST00000590556 NET1Q7Z628 596 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-214ENST00000590556 PTOV1Q86YD1 416 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 MISPQ8IVT2 679 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 SIAH3Q8IW03 269 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 FAM109AQ8N4B1 249 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 C11orf65Q8NCR3 313 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 OR4K17Q8NGC6 315 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 PHOSPHO1Q8TCT1 267 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 OIT3Q8WWZ8 545 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 SPATA9Q9BWV2 254 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 QRSL1Q9H0R6 528 aaKnown RBP17.46■□□□□ 0.39
DDX39A-214ENST00000590556 DEFB127Q9H1M4 99 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 PIF1Q9H611 641 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 ZNF703Q9H7S9 590 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-214ENST00000590556 SUCOQ9UBS9 1254 aaKnown RBP17.46■□□□□ 0.39
DDX39A-214ENST00000590556 NPIPA1Q9UND3 350 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 AP3M1Q9Y2T2 418 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 HRH3Q9Y5N1 445 aa17.46■□□□□ 0.39
DDX39A-214ENST00000590556 CENPVL1A0A0U1RR11 272 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 AGAP5A6NIR3 686 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 GTPBP1O00178 669 aaKnown RBP17.45■□□□□ 0.38
DDX39A-214ENST00000590556 PGM3O95394 542 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 ENDOUP21128 410 aaKnown RBP17.45■□□□□ 0.38
DDX39A-214ENST00000590556 GZMMP51124 257 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 PSME3P61289 254 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 TLE1Q04724 770 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 CD226Q15762 336 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 BNC2Q6ZN30 1099 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-214ENST00000590556 HMGN2P46Q86SG4 172 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 SLC15A3Q8IY34 581 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 PEX5LQ8IYB4 626 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 ZZZ3Q8IYH5 903 aa17.45■□□□□ 0.38
DDX39A-214ENST00000590556 BBS10Q8TAM1 723 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms