RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GATSQ8NAP1 163 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 OR6T1Q8NGN1 323 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 SLC22A8Q8TCC7 542 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 PSMF1Q92530 271 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 CNOT9Q92600 299 aaKnown RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 HGDQ93099 445 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 VPS50Q96JG6 964 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 ZNF300Q96RE9 604 aaPredicted RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 NODALQ96S42 347 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 PRR14Q9BWN1 585 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 RTN4RQ9BZR6 473 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 HOXD1Q9GZZ0 328 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 CDCP1Q9H5V8 836 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 YY1AP1Q9H869 796 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 NTN4Q9HB63 628 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 UBQLN4Q9NRR5 601 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 ZNF232Q9UNY5 417 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 MSRB2Q9Y3D2 182 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 ENPP4Q9Y6X5 453 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 CDHR4A6H8M9 788 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 SERINC4A6NH21 518 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 OR6C70A6NIJ9 312 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 CASQ2O14958 399 aaPredicted RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 CLOCKO15516 846 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 OIP5O43482 229 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 TPST2O60704 377 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 FBXO45P0C2W1 286 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 GKN3PP0CG01 181 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 PRG2P13727 222 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 HOXB6P17509 224 aaKnown RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 TBXA2RP21731 343 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 PEX2P28328 305 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 LCN1P31025 176 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 SOX3P41225 446 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 IST1P53990 364 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 MLF1P58340 268 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 HOXC5Q00444 222 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 PPP1R8Q12972 351 aaKnown RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 TRIP10Q15642 601 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 CD226Q15762 336 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 EIPR1Q53HC9 387 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 DCAF10Q5QP82 559 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 H3F3CQ6NXT2 135 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 DEF8Q6ZN54 512 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 ZNF605Q86T29 641 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 TSPYL5Q86VY4 417 aaPredicted RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 RPS19BP1Q86WX3 136 aaKnown RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 ARMC10Q8N2F6 343 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 SIRT6Q8N6T7 355 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 OR5M3Q8NGP4 307 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 BRIX1Q8TDN6 353 aaKnown RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 ARSGQ96EG1 525 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 THOC3Q96J01 351 aaKnown RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 IP6K3Q96PC2 410 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 RASSF4Q9H2L5 321 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 DNAJB12Q9NXW2 375 aaKnown RBP10.38□□□□□ -0.75
VMP1-207ENST00000588131 STOML1Q9UBI4 398 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 DNAJB9Q9UBS3 223 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 SLC13A4Q9UKG4 626 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 SLC9A8Q9Y2E8 581 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 NTNG1Q9Y2I2 539 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 DTNAQ9Y4J8 743 aa10.38□□□□□ -0.75
VMP1-207ENST00000588131 ARGFXA6NJG6 315 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 SAC3D1A6NKF1 404 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 C17orf51A8MQB3 221 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 SCDO00767 359 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ADAM10O14672 748 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 FFAR1O14842 300 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 HS6ST1O60243 411 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 FADS1O60427 444 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ADAM11O75078 769 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 DEAF1O75398 565 aaPredicted RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 DNAJB5O75953 348 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 OR6B1O95007 311 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 PRSS23O95084 383 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 NGFRP08138 427 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 PRKAR1AP10644 381 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 NAGAP17050 411 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 RRM2P31350 389 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ID4P47928 161 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 PTDSS1P48651 473 aaKnown RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 ZNF136P52737 540 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 RGS8P57771 180 aaPredicted RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 EFR3AQ14156 821 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 GANABQ14697 944 aaKnown RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 LRRC36Q1X8D7 754 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ZNF791Q3KP31 576 aaPredicted RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 OGFRL1Q5TC84 451 aaPredicted RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 OR2T5Q6IEZ7 315 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 TMEM179BQ7Z7N9 219 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 MARCH3Q86UD3 253 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 LSRQ86X29 649 aaPredicted RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 EPHX4Q8IUS5 362 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 SLC5A8Q8N695 610 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 SLC15A4Q8N697 577 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ZNF527Q8NB42 609 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 POGLUT1Q8NBL1 392 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ICA1LQ8NDH6 482 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 OR2T29Q8NH02 315 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms