RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 MATN1P21941 496 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 TCEA1P23193 301 aaKnown RBP18.36■□□□□ 0.53
VAT1-203ENST00000587062 STARP49675 285 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 LHX2P50458 406 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 ASCL1P50553 236 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 DCST2Q5T1A1 773 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 NXNQ6DKJ4 435 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 SEM1Q6ZVN7 128 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 C6orf120Q7Z4R8 191 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 GRAMD2AQ8IUY3 354 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 DMRTC2Q8IXT2 367 aaPredicted RBP18.36■□□□□ 0.53
VAT1-203ENST00000587062 TRIML2Q8N7C3 387 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 UCN2Q96RP3 112 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 TUBA1CQ9BQE3 449 aa18.36■□□□□ 0.53
VAT1-203ENST00000587062 UNC79Q9P2D8 2635 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 CLCA1A8K7I4 914 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 E9PBE3 544 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 KLF11O14901 512 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 CPSF4O95639 269 aaKnown RBP18.35■□□□□ 0.53
VAT1-203ENST00000587062 TMIGD3P0DMS9 266 aaPredicted RBP18.35■□□□□ 0.53
VAT1-203ENST00000587062 CAPN3P20807 821 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 UQCRC2P22695 453 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 ANXA11P50995 505 aaKnown RBP18.35■□□□□ 0.53
VAT1-203ENST00000587062 TFF3Q07654 80 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 EXOSC6Q5RKV6 272 aaKnown RBP18.35■□□□□ 0.53
VAT1-203ENST00000587062 ATAD3BQ5T9A4 648 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 OR2A2Q6IF42 318 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 HDXQ7Z353 690 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 GALNT10Q86SR1 603 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 KIF18BQ86Y91 864 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 LIX1LQ8IVB5 337 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 GLB1L3Q8NCI6 653 aaPredicted RBP18.35■□□□□ 0.53
VAT1-203ENST00000587062 OR5AK3PQ8NH89 298 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 PIWIL2Q8TC59 973 aaKnown RBP18.35■□□□□ 0.53
VAT1-203ENST00000587062 ACTRT2Q8TDY3 377 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 ZBTB8AQ96BR9 441 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 SLC35G5Q96KT7 338 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 TREX2Q9BQ50 279 aaPredicted RBP18.35■□□□□ 0.53
VAT1-203ENST00000587062 ZNF559Q9BR84 538 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 TRIM8Q9BZR9 551 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 GPATCH2Q9NW75 528 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 KCNN3Q9UGI6 736 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 AP4B1Q9Y6B7 739 aa18.35■□□□□ 0.53
VAT1-203ENST00000587062 RNF103-CHMP3A0A140T963 221 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 GTPBP1O00178 669 aaKnown RBP18.34■□□□□ 0.53
VAT1-203ENST00000587062 SYT5O00445 386 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 RCBTB2O95199 551 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 PRF1P14222 555 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 UQCRC1P31930 480 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 MYBPHQ13203 477 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 FLYWCH1Q4VC44 716 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 CCNJQ5T5M9 372 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 WDR75Q8IWA0 830 aaKnown RBP18.34■□□□□ 0.53
VAT1-203ENST00000587062 UBQLNLQ8IYU4 475 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 ACBD4Q8NC06 268 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 B4GALNT2Q8NHY0 566 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 PHOSPHO1Q8TCT1 267 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 OTUB1Q96FW1 271 aaPredicted RBP18.34■□□□□ 0.53
VAT1-203ENST00000587062 OR7D2Q96RA2 312 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 SFXN3Q9BWM7 321 aa18.34■□□□□ 0.53
VAT1-203ENST00000587062 PAQR5Q9NXK6 330 aaPredicted RBP18.34■□□□□ 0.53
VAT1-203ENST00000587062 MARCOQ9UEW3 520 aaPredicted RBP18.34■□□□□ 0.53
VAT1-203ENST00000587062 HCFC1P51610 2035 aa18.33■□□□□ 0.53
VAT1-203ENST00000587062 OR2M5A3KFT3 312 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 ENO4A6NNW6 628 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 H3BML4 177 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 SDHDO14521 159 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 GMFGO60234 142 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 IDO1P14902 403 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 ZNF17P17021 662 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 IGFBP2P18065 325 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 ME2P23368 584 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 EPHA3P29320 983 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 CHI3L1P36222 383 aaPredicted RBP18.33■□□□□ 0.52
VAT1-203ENST00000587062 ATP12AP54707 1039 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 CLDN18P56856 261 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 OCRLQ01968 901 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 TLE4Q04727 773 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 SGCBQ16585 318 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 FAM174BQ3ZCQ3 159 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 PDSS1Q5T2R2 415 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 ARSKQ6UWY0 536 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 APOOLQ6UXV4 268 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 C16orf62Q7Z3J2 963 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 CLECL1Q8IZS7 167 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 DYDC1Q8WWB3 177 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 RNASE6Q93091 150 aaKnown RBP18.33■□□□□ 0.52
VAT1-203ENST00000587062 ATP6V1G3Q96LB4 118 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 PIGMQ9H3S5 423 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 NPDC1Q9NQX5 325 aaPredicted RBP18.33■□□□□ 0.52
VAT1-203ENST00000587062 AIG1Q9NVV5 245 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 VDAC3Q9Y277 283 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 ZNF337Q9Y3M9 751 aa18.33■□□□□ 0.52
VAT1-203ENST00000587062 GOLGA8QA0A0J9YX86 632 aa18.32■□□□□ 0.52
VAT1-203ENST00000587062 GOLGA8OA6NCC3 632 aa18.32■□□□□ 0.52
VAT1-203ENST00000587062 GOLGA8NF8WBI6 632 aa18.32■□□□□ 0.52
VAT1-203ENST00000587062 HCRTR2O43614 444 aa18.32■□□□□ 0.52
VAT1-203ENST00000587062 TNFRSF21O75509 655 aa18.32■□□□□ 0.52
VAT1-203ENST00000587062 STX11O75558 287 aa18.32■□□□□ 0.52
VAT1-203ENST00000587062 NUDT14O95848 222 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms