RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ANGPTL1O95841 491 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 TAC1P20366 129 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 DDCP20711 480 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 GABRA3P34903 492 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 EIF1AXP47813 144 aaKnown RBP10.41□□□□□ -0.74
LIG3-207ENST00000586119 EEFSECP57772 596 aaKnown RBP10.41□□□□□ -0.74
LIG3-207ENST00000586119 KRTAP1-1Q07627 177 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 TSC22D1Q15714 1073 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 CYP27C1Q4G0S4 372 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 SPDYAQ5MJ70 313 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 AGBL2Q5U5Z8 902 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 FAM71E1Q6IPT2 247 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 ANKRD26P1Q6NSI1 321 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 MFSD12Q6NUT3 480 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 ZNF704Q6ZNC4 412 aaPredicted RBP10.41□□□□□ -0.74
LIG3-207ENST00000586119 C20orf204Q6ZNR8 217 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 PLEKHM3Q6ZWE6 761 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 FAM214BQ7L5A3 538 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 ZNF551Q7Z340 670 aaPredicted RBP10.41□□□□□ -0.74
LIG3-207ENST00000586119 ZAR1Q86SH2 424 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 WFDC8Q8IUA0 241 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 METTL25Q8N6Q8 603 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 GOLGA6L1Q8N7Z2 621 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 GBP7Q8N8V2 638 aaPredicted RBP10.41□□□□□ -0.74
LIG3-207ENST00000586119 GATSQ8NAP1 163 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.41□□□□□ -0.74
LIG3-207ENST00000586119 PLPPR2Q96GM1 343 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 EGLN2Q96KS0 407 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 AMDHD1Q96NU7 426 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 IQCGQ9H095 443 aaKnown RBP10.41□□□□□ -0.74
LIG3-207ENST00000586119 CENPHQ9H3R5 247 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 GSTO2Q9H4Y5 243 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 SDHAF3Q9NRP4 125 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 FBXO34Q9NWN3 711 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 ZNF175Q9Y473 711 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 A0A087WV62 115 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 CXCL13O43927 109 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 IL11P20809 199 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 ATP5F1P24539 256 aaPredicted RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 PRKAA2P54646 552 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 MRPS22P82650 360 aaKnown RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 TNK1Q13470 666 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 DECR1Q16698 335 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 SPIN4Q56A73 249 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 GALNT18Q6P9A2 607 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 ATG4DQ86TL0 474 aaPredicted RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 SLC22A9Q8IVM8 553 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 SAMD14Q8IZD0 417 aaPredicted RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 C4orf33Q8N1A6 199 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 OR2L13Q8N349 312 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 OR4C3Q8NH37 302 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 OR10D3Q8NH80 312 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 LILRB1Q8NHL6 650 aaPredicted RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 RAB3IL1Q8TBN0 382 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 NEUROG1Q92886 237 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 GFM2Q969S9 779 aaKnown RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 CCDC126Q96EE4 140 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 OTUB1Q96FW1 271 aaPredicted RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 ADGRG7Q96K78 797 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 LMF2Q9BU23 707 aaKnown RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 PRRG4Q9BZD6 226 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 SHCBP1LQ9BZQ2 653 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 C12orf49Q9H741 205 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 TMEM185BQ9H7F4 350 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 PTGES2Q9H7Z7 377 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 MID1IP1Q9NPA3 183 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 EQTNQ9NQ60 294 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 FAM120CQ9NX05 1096 aaKnown RBP10.4□□□□□ -0.74
LIG3-207ENST00000586119 AP4B1Q9Y6B7 739 aa10.4□□□□□ -0.74
LIG3-207ENST00000586119 A0A0J9YW62 118 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 TNFSF11O14788 317 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 TYROBPO43914 113 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 PLIN3O60664 434 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 COQ9O75208 318 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 PROCP04070 461 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 SHC1P29353 583 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 RNF144AP50876 292 aaPredicted RBP10.39□□□□□ -0.75
LIG3-207ENST00000586119 SLC18A1P54219 525 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 PRKAG1P54619 331 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 RPS3AP61247 264 aaKnown RBP10.39□□□□□ -0.75
LIG3-207ENST00000586119 NAA20P61599 178 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 PPP2R2BQ00005 443 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 ZNF763Q0D2J5 394 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 C17orf67Q0P5P2 114 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 GANABQ14697 944 aaKnown RBP10.39□□□□□ -0.75
LIG3-207ENST00000586119 GLYR1Q49A26 553 aaPredicted RBP10.39□□□□□ -0.75
LIG3-207ENST00000586119 BEX5Q5H9J7 111 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 CCNYL1Q8N7R7 359 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 FBXO30Q8TB52 745 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 POC1BQ8TC44 478 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 ROBO4Q8WZ75 1007 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 AKAP1Q92667 903 aaKnown RBP eCLIP10.39□□□□□ -0.75
LIG3-207ENST00000586119 CIDECQ96AQ7 238 aaPredicted RBP10.39□□□□□ -0.75
LIG3-207ENST00000586119 TLCD1Q96CP7 247 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 TBL1XR1Q9BZK7 514 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 Q9N2J8 555 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 ZNF701Q9NV72 531 aaPredicted RBP10.39□□□□□ -0.75
LIG3-207ENST00000586119 DDX18Q9NVP1 670 aaKnown RBP10.39□□□□□ -0.75
LIG3-207ENST00000586119 SIRT5Q9NXA8 310 aa10.39□□□□□ -0.75
LIG3-207ENST00000586119 EMCNQ9ULC0 261 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms