RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CPNE5Q9HCH3 593 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 EXOSC3Q9NQT5 275 aaKnown RBP11.89□□□□□ -0.51
TRIM47-202ENST00000585333 SACM1LQ9NTJ5 587 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 KLRF1Q9NZS2 232 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 ANAPC2Q9UJX6 822 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 PACSIN3Q9UKS6 424 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 ZNF443Q9Y2A4 671 aaPredicted RBP11.89□□□□□ -0.51
TRIM47-202ENST00000585333 KLF13Q9Y2Y9 288 aaPredicted RBP11.89□□□□□ -0.51
TRIM47-202ENST00000585333 PCDHGB6Q9Y5F9 930 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 FRYQ5TBA9 3013 aa11.89□□□□□ -0.51
TRIM47-202ENST00000585333 ACACAQ13085 2346 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 DHRS12A0PJE2 317 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 PRAMEF27A3QJZ7 478 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 SERINC4A6NH21 518 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 FAM47E-STBD1D6RA91 191 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 FCMRO60667 390 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 ICOSLGO75144 302 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 UGT2B11O75310 529 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 FKBP6O75344 327 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 UGT2B17O75795 530 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 CSTAP01040 98 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 UBL4AP11441 157 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 SFTPCP11686 197 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 NCK1P16333 377 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 ELAVL4P26378 380 aaKnown RBP11.88□□□□□ -0.51
TRIM47-202ENST00000585333 KCNJ5P48544 419 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 KCNJ10P78508 379 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 ARG2P78540 354 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
TRIM47-202ENST00000585333 GK3PQ14409 553 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 FGFBP1Q14512 234 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 KLHL26Q53HC5 615 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 RPS26P11Q5JNZ5 115 aaPredicted RBP11.88□□□□□ -0.51
TRIM47-202ENST00000585333 IGFL2Q6UWQ7 119 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 IL20RBQ6UXL0 311 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 RANBP3LQ86VV4 465 aaPredicted RBP11.88□□□□□ -0.51
TRIM47-202ENST00000585333 SPPL2CQ8IUH8 684 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 PRR22Q8IZ63 422 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 ZADH2Q8N4Q0 377 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 UTP4Q969X6 686 aaKnown RBP11.88□□□□□ -0.51
TRIM47-202ENST00000585333 PYURFQ96I23 114 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 CNTNAP3BQ96NU0 1288 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 SMAD5Q99717 465 aaKnown RBP11.88□□□□□ -0.51
TRIM47-202ENST00000585333 OSBPL11Q9BXB4 747 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 CNTNAP3Q9BZ76 1288 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 ADNPQ9H2P0 1102 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 LRFN1Q9P244 771 aa11.88□□□□□ -0.51
TRIM47-202ENST00000585333 FAM32AQ9Y421 112 aaKnown RBP11.88□□□□□ -0.51
TRIM47-202ENST00000585333 TCRBV3S1A0A5B6 114 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 A6NL46 340 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 ZNF264O43296 627 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 FMO6PO60774 539 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 NME6O75414 186 aaPredicted RBP11.87□□□□□ -0.51
TRIM47-202ENST00000585333 OR6B1O95007 311 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 IGKV1D-16P01601 117 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 C1QCP02747 245 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 IFNW1P05000 195 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 RAP2AP10114 183 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 FBXW4P57775 412 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 COPZ1P61923 177 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 MS4A2Q01362 244 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 MAPK11Q15759 364 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 GRAMD1BQ3KR37 738 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 PDZK1Q5T2W1 519 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 FCRLBQ6BAA4 426 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 AAGABQ6PD74 315 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 LYPD8Q6UX82 237 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 IGFL3Q6UXB1 125 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 CYP2R1Q6VVX0 501 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 POGLUT1Q8NBL1 392 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 PHOSPHO1Q8TCT1 267 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 RNF138Q8WVD3 245 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 HGDQ93099 445 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 TAMM41Q96BW9 452 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 TPD52L3Q96J77 140 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 ZNF347Q96SE7 839 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 ZNF552Q9H707 407 aaPredicted RBP11.87□□□□□ -0.51
TRIM47-202ENST00000585333 PTGES2Q9H7Z7 377 aa11.87□□□□□ -0.51
TRIM47-202ENST00000585333 LIN28AQ9H9Z2 209 aaKnown RBP11.87□□□□□ -0.51
TRIM47-202ENST00000585333 TESQ9UGI8 421 aaKnown RBP11.87□□□□□ -0.51
TRIM47-202ENST00000585333 BOKQ9UMX3 212 aaPredicted RBP11.87□□□□□ -0.51
TRIM47-202ENST00000585333 APC2O95996 2303 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 WDFY3Q8IZQ1 3526 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 TRAV17A0A0B4J275 112 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 KLRC4-KLRK1H3BQV0 150 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 AP3D1O14617 1153 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 FADS1O60427 444 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 DPM1O60762 260 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 SLC25A12O75746 678 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 DNAJB5O75953 348 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 LGI1O95970 557 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 FESP07332 822 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 ATP6V1B2P21281 511 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 SLC7A1P30825 629 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 MSX2P35548 267 aaPredicted RBP11.86□□□□□ -0.51
TRIM47-202ENST00000585333 MASP1P48740 699 aa11.86□□□□□ -0.51
TRIM47-202ENST00000585333 RGS8P57771 180 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms