RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ALG1L2C9J202 215 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 RCBTB2O95199 551 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 C6orf47O95873 294 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 SOAT1P35610 550 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 DLX5P56178 289 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 CLDN8P56748 225 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 CLDN18P56856 261 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 RPS3AP61247 264 aaKnown RBP11.2□□□□□ -0.62
SS18-225ENST00000585121 TNFAIP8L3Q5GJ75 292 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 TMEM200AQ86VY9 491 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 RIMKLAQ8IXN7 391 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 PSMA8Q8TAA3 256 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 FAM110BQ8TC76 370 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 ZBTB9Q96C00 473 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 SFXN3Q9BWM7 321 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 DPY30Q9C005 99 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 PIGUQ9H490 435 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 ZNF395Q9H8N7 513 aaPredicted RBP11.2□□□□□ -0.62
SS18-225ENST00000585121 AKTIPQ9H8T0 292 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 SIRT3Q9NTG7 399 aaPredicted RBP11.2□□□□□ -0.62
SS18-225ENST00000585121 L3MBTL1Q9Y468 752 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 FBN2P35556 2912 aa11.2□□□□□ -0.62
SS18-225ENST00000585121 A0A087WZY1 265 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 C17orf51A8MQB3 221 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 GMFGO60234 142 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 OXSR1O95747 527 aaPredicted RBP11.19□□□□□ -0.62
SS18-225ENST00000585121 AGFG1P52594 562 aaKnown RBP11.19□□□□□ -0.62
SS18-225ENST00000585121 C21orf58P58505 322 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 B3GALT5-AS1P59052 145 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 FBXL19-AS1Q494R0 122 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 OR2A2Q6IF42 318 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CDC73Q6P1J9 531 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 ADGRE4PQ86SQ3 457 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 GALNT10Q86SR1 603 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 ZNF527Q8NB42 609 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 VPS37AQ8NEZ2 397 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 OR4C3Q8NH37 302 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 INTS12Q96CB8 462 aaKnown RBP11.19□□□□□ -0.62
SS18-225ENST00000585121 OTUB1Q96FW1 271 aaPredicted RBP11.19□□□□□ -0.62
SS18-225ENST00000585121 HOXD1Q9GZZ0 328 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CXorf36Q9H7Y0 433 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CLCF1Q9UBD9 225 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 ZNF337Q9Y3M9 751 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 AP4B1Q9Y6B7 739 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 MED12Q93074 2177 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 OR2M5A3KFT3 312 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 SLC22A20A6NK97 555 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 H3BML4 177 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 H3BNH8 94 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CRHP06850 196 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 LBPP18428 481 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CPA2P48052 419 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 ZNF41P51814 821 aaPredicted RBP11.19□□□□□ -0.62
SS18-225ENST00000585121 MPP2Q14168 576 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 ANXA8L1Q5VT79 327 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 ATG16L1Q676U5 607 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 POMZP3Q6PJE2 187 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 APOOLQ6UXV4 268 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CAMKMTQ7Z624 323 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CDH24Q86UP0 819 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 LRRC34Q8IZ02 419 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 GATSQ8NAP1 163 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 OR5M1Q8NGP8 315 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 SMPDL3BQ92485 455 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CDS1Q92903 461 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 SORT1Q99523 831 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 NUF2Q9BZD4 464 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 RTN4RQ9BZR6 473 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 PIGMQ9H3S5 423 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 NKIRAS1Q9NYS0 192 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 HAO1Q9UJM8 370 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 POLQO75417 2590 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 CCDC168Q8NDH2 2452 aa11.19□□□□□ -0.62
SS18-225ENST00000585121 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
SS18-225ENST00000585121 TMEM120BA0PK00 339 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 DUXAA6NLW8 204 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 B4DXG7 233 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 RNASET2O00584 256 aaKnown RBP11.18□□□□□ -0.62
SS18-225ENST00000585121 SEC14L5O43304 696 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 HCRTR2O43614 444 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 TNFRSF21O75509 655 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 CLNS1AP54105 237 aaKnown RBP11.18□□□□□ -0.62
SS18-225ENST00000585121 KRTAP10-9P60411 292 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 BST1Q10588 318 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 SGCBQ16585 318 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 FLYWCH1Q4VC44 716 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 EXOSC6Q5RKV6 272 aaKnown RBP11.18□□□□□ -0.62
SS18-225ENST00000585121 DCST2Q5T1A1 773 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 CCNJQ5T5M9 372 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 OR4F3Q6IEY1 312 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 ZZZ3Q8IYH5 903 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 GCNT2Q8N0V5 402 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 OR4A15Q8NGL6 344 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 OR5AK3PQ8NH89 298 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 MGARPQ8TDB4 240 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 FAM222BQ8WU58 562 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 NUDT8Q8WV74 236 aa11.18□□□□□ -0.62
SS18-225ENST00000585121 ZBTB8AQ96BR9 441 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms