RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 RAB6CQ53S08 254 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 TP53INP2Q8IXH6 220 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 ACOT11Q8WXI4 607 aaPredicted RBP12.32□□□□□ -0.44
RNF43-208ENST00000584437 RAB6CQ9H0N0 254 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 DNTTIP1Q9H147 329 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 IL20RAQ9UHF4 553 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 NAALAD2Q9Y3Q0 740 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 A8MXE2 369 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 GMDSO60547 372 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 GPM6BQ13491 265 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 ELOCQ15369 112 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 PHF19Q5T6S3 580 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 LACC1Q8IV20 430 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 ZNF695Q8IW36 515 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 OR6V1Q8N148 313 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 BOCQ9BWV1 1114 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 NAA50Q9GZZ1 169 aaKnown RBP12.32□□□□□ -0.44
RNF43-208ENST00000584437 PRMT8Q9NR22 394 aaPredicted RBP12.32□□□□□ -0.44
RNF43-208ENST00000584437 KIF25Q9UIL4 384 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 GJD2Q9UKL4 321 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 A8MU76 341 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 CACNG3O60359 315 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 SLC2A5P22732 501 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 POLR2HP52434 150 aaKnown RBP12.32□□□□□ -0.44
RNF43-208ENST00000584437 BTN1A1Q13410 526 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 UBXN2BQ14CS0 331 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 ZNF546Q86UE3 836 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 CREB3L4Q8TEY5 395 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 RBFOX1Q9NWB1 397 aaKnown RBP12.32□□□□□ -0.44
RNF43-208ENST00000584437 KLHL13Q9P2N7 655 aa12.32□□□□□ -0.44
RNF43-208ENST00000584437 RIMBP3CA6NJZ7 1639 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RIMBP3BA6NNM3 1639 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RIMBP3Q9UFD9 1639 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 CDHR4A6H8M9 788 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 MT-ND4P03905 459 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 FOSL1P15407 271 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RNF144AP50876 292 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 SGSHP51688 502 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 NNATQ16517 81 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 OR51T1Q8NGJ9 327 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 PAQR8Q8TEZ7 354 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 GAS2L1Q99501 681 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 DDX31Q9H8H2 851 aaKnown RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 PDE7BQ9NP56 450 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 PRDM9Q9NQV7 894 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 IL17CQ9P0M4 197 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 REV1Q9UBZ9 1251 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 PEAK1Q9H792 1746 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 A6NIZ1 184 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 OIP5O43482 229 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 AP1G1O43747 822 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 KCNJ5P48544 419 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RAP1BP61224 184 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RAP1AP62834 184 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 CAMK2DQ13557 499 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 GPR50Q13585 617 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 MPP7Q5T2T1 576 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 CARD17Q5XLA6 110 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 ZC3H14Q6PJT7 736 aaKnown RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 FAM83HQ6ZRV2 1179 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 ZNF619Q8N2I2 560 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 DNAJC5GQ8N7S2 189 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 OR5T1Q8NG75 326 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 OR5L2Q8NGL0 311 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 PSD2Q9BQI7 771 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 PITHD1Q9GZP4 211 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 BACE2Q9Y5Z0 518 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 AGPAT2O15120 278 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 PEX14O75381 377 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 CDC123O75794 336 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 SSTR2P30874 369 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 RAB31Q13636 194 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 SLC22A25Q6T423 547 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 CLDN22Q8N7P3 220 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 TMEM102Q8N9M5 508 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 ARL5BQ96KC2 179 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 DEFB126Q9BYW3 111 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 LDAHQ9H6V9 325 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 DMRT3Q9NQL9 472 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 TREX1Q9NSU2 369 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 LUZP4Q9P127 313 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 DNMT3AQ9Y6K1 912 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 ANTXRLA6NF34 631 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 BRINP1O60477 761 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 MCCD1P59942 119 aaPredicted RBP12.31□□□□□ -0.44
RNF43-208ENST00000584437 MLC1Q15049 377 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 TMPPEQ6ZT21 453 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 CYB561A3Q8NBI2 242 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 IGSF21Q96ID5 467 aa12.31□□□□□ -0.44
RNF43-208ENST00000584437 GPR32O75388 356 aa12.3□□□□□ -0.44
RNF43-208ENST00000584437 MPIG6BO95866 241 aa12.3□□□□□ -0.44
RNF43-208ENST00000584437 RAC2P15153 192 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms