RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NME2P1O60361 137 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 FCMRO60667 390 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ICOSLGO75144 302 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 UGT2B17O75795 530 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 DNAJC8O75937 253 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-203ENST00000580986 OXSR1O95747 527 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-203ENST00000580986 P04436 131 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 DBIP07108 87 aaKnown RBP9.53□□□□□ -0.88
CCDC47-203ENST00000580986 SP1P08047 785 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 NID1P14543 1247 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 NME2P22392 152 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ELAVL4P26378 380 aaKnown RBP9.53□□□□□ -0.88
CCDC47-203ENST00000580986 CLK3P49761 638 aaKnown RBP9.53□□□□□ -0.88
CCDC47-203ENST00000580986 GAS1P54826 345 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 CASP9P55211 416 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 NCALDP61601 193 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 CCNJQ5T5M9 372 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 RNF220Q5VTB9 566 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 FNDC7Q5VTL7 733 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 SLC25A25Q6KCM7 469 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 PGM2L1Q6PCE3 622 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 BRICD5Q6PL45 260 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ASB18Q6ZVZ8 466 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ASRGL1Q7L266 308 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ZAR1Q86SH2 424 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 GRAMD2AQ8IUY3 354 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 PEX5LQ8IYB4 626 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 PRR22Q8IZ63 422 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 POGLUT1Q8NBL1 392 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 FAM13CQ8NE31 585 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 FAM71CQ8NEG0 241 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 TOR1AIP2Q8NFQ8 470 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 OR4C3Q8NH37 302 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 NFKBIDQ8NI38 313 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 GRHL3Q8TE85 626 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 MAL2Q969L2 176 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 DTNBP1Q96EV8 351 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 TMEM41AQ96HV5 264 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 RNF145Q96MT1 663 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 SIGLEC12Q96PQ1 595 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 KCTD14Q9BQ13 255 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-203ENST00000580986 OSBPL11Q9BXB4 747 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ARMC7Q9H6L4 198 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 GORASP2Q9H8Y8 452 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 SDHAF3Q9NRP4 125 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 FBXO34Q9NWN3 711 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ADA2Q9NZK5 511 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 MAGEL2Q9UJ55 1249 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 MKLN1Q9UL63 735 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 B3GNT3Q9Y2A9 372 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 TP53TG5Q9Y2B4 290 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 SLC35A3Q9Y2D2 325 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 DTNAQ9Y4J8 743 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 H3BNH8 94 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 KLRC4-KLRK1H3BQV0 150 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 SYT5O00445 386 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 GSC2O15499 205 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 SERPINB7O75635 380 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 IFNA14P01570 189 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 PDGFAP04085 211 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 FAM87AP0C7U9 286 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 CCL3P10147 92 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 HPGDP15428 266 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 GGT1P19440 569 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 CNR1P21554 472 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 MSX1P28360 303 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 PRKAR1BP31321 381 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 PTGDSP41222 190 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 CHRNEQ04844 493 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 C17orf67Q0P5P2 114 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 CEACAM7Q14002 265 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 FGFBP1Q14512 234 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF169Q14929 603 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 LARS2Q15031 903 aaKnown RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 HYAL4Q2M3T9 481 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 GRAMD1BQ3KR37 738 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 LIN52Q52LA3 116 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF766Q5HY98 468 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 MTX3Q5HYI7 312 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 SPINK14Q6IE38 97 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 DHRS4L2Q6PKH6 230 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 MDGA2Q7Z553 956 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 RBMXL3Q8N7X1 1067 aaKnown RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 ZFP62Q8NB50 900 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 PNPLA2Q96AD5 504 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 ASB9Q96DX5 294 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 C5orf34Q96MH7 638 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 NODALQ96S42 347 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 UBL7Q96S82 380 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 FAM173AQ9BQD7 235 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 TBL1XR1Q9BZK7 514 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 SLC25A18Q9H1K4 315 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 METTL7AQ9H8H3 244 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 CACYBPQ9HB71 228 aaKnown RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 PROK2Q9HC23 129 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 EXOSC3Q9NQT5 275 aaKnown RBP9.52□□□□□ -0.89
CCDC47-203ENST00000580986 KCNE5Q9UJ90 142 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF232Q9UNY5 417 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 WIF1Q9Y5W5 379 aa9.52□□□□□ -0.89
CCDC47-203ENST00000580986 SNX13Q9Y5W8 968 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms