RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TNFAIP8L2Q6P589 184 aaPredicted RBP14.23□□□□□ -0.13
SS18-216ENST00000580751 TMEM81Q6P7N7 255 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 PATL1Q86TB9 770 aaKnown RBP14.23□□□□□ -0.13
SS18-216ENST00000580751 FAM156AQ8NDB6 213 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 OIT3Q8WWZ8 545 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 STMN2Q93045 179 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 TRNT1Q96Q11 434 aaKnown RBP14.23□□□□□ -0.13
SS18-216ENST00000580751 PCDHAC1Q9H158 963 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 METTL7AQ9H8H3 244 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 POLE3Q9NRF9 147 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 PACSIN3Q9UKS6 424 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 CNOT11Q9UKZ1 510 aaKnown RBP14.23□□□□□ -0.13
SS18-216ENST00000580751 ZNF462Q96JM2 2506 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 RP1L1Q8IWN7 2480 aaPredicted RBP14.22□□□□□ -0.13
SS18-216ENST00000580751 TCRBV3S1A0A5B6 114 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 PRAMEF25A6NGN4 478 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 C5orf58C9J3I9 102 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 PEX1O43933 1283 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 MGRN1O60291 552 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 CYP4B1P13584 511 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 ATP6V1C1P21283 382 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 CNR1P21554 472 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 KDELR2P33947 212 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 CRISP3P54108 245 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 HPCAP84074 193 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 SNTA1Q13424 505 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 PRAMEF20Q5VT98 475 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 FIGNL1Q6PIW4 674 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 FAM180AQ6UWF9 173 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 C16orf62Q7Z3J2 963 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 SULF2Q8IWU5 870 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 C10orf111Q8N326 155 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 POGLUT1Q8NBL1 392 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 CHDHQ8NE62 594 aaPredicted RBP14.22□□□□□ -0.13
SS18-216ENST00000580751 BHLHE22Q8NFJ8 381 aaPredicted RBP14.22□□□□□ -0.13
SS18-216ENST00000580751 BBS10Q8TAM1 723 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 FAM110BQ8TC76 370 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 SLC38A5Q8WUX1 472 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 RASSF5Q8WWW0 418 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 FAM173AQ9BQD7 235 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 DOHHQ9BU89 302 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 SPATA5L1Q9BVQ7 753 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 KLRF1Q9NZS2 232 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 EGFL7Q9UHF1 273 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 RPS6KA6Q9UK32 745 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 ABCG2Q9UNQ0 655 aa14.22□□□□□ -0.13
SS18-216ENST00000580751 SAMD4AQ9UPU9 718 aaKnown RBP14.22□□□□□ -0.13
SS18-216ENST00000580751 A0A0G2JPF8 293 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 TTLL8A6PVC2 850 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 HNRNPCL2B2RXH8 293 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 HNRNPCL3B7ZW38 293 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 B8ZZF3 427 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 ICOSLGO75144 302 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 SNX4O95219 450 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 CRYABP02511 175 aaKnown RBP14.21□□□□□ -0.13
SS18-216ENST00000580751 PRB1P04280 392 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 HNRNPCL4P0DMR1 293 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 OR12D1P0DN82 309 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 ETS2P15036 469 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 MSX2P35548 267 aaPredicted RBP14.21□□□□□ -0.13
SS18-216ENST00000580751 CASP3P42574 277 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 MEOX1P50221 254 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 CASP9P55211 416 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 PCBP3P57721 371 aaKnown RBP14.21□□□□□ -0.13
SS18-216ENST00000580751 GPR85P60893 370 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 CCNIQ14094 377 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 ARHGAP11BQ3KRB8 267 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 CCNJQ5T5M9 372 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 SLC30A6Q6NXT4 461 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 LRRC74BQ6ZQY2 392 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.21□□□□□ -0.13
SS18-216ENST00000580751 KRT73Q86Y46 540 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 ZNF843Q8N446 348 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 ZFP62Q8NB50 900 aaPredicted RBP14.21□□□□□ -0.13
SS18-216ENST00000580751 OR2M7Q8NG81 312 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 XAGE5Q8WWM1 108 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 FIG4Q92562 907 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 RAB8BQ92930 207 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 NODALQ96S42 347 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 OSBPL11Q9BXB4 747 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 UGT2B28Q9BY64 529 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 ANGPTL4Q9BY76 406 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 PIF1Q9H611 641 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 DEPPQ9NTK1 212 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 DCAF13Q9NV06 445 aaKnown RBP14.21□□□□□ -0.13
SS18-216ENST00000580751 RALYQ9UKM9 306 aaKnown RBP14.21□□□□□ -0.13
SS18-216ENST00000580751 KCNE3Q9Y6H6 103 aa14.21□□□□□ -0.13
SS18-216ENST00000580751 A0A0G2JMM0 328 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 A0A1W2PPB8 328 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 A0A1W2PRS3 328 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 KIR3DP1A8MWS1 328 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 G3V3Y1 287 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 SUV39H1O43463 412 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 SERPINB7O75635 380 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 PGM3O95394 542 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 UTS2O95399 124 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 IGKV1D-16P01601 117 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 C1QCP02747 245 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 NGFRP08138 427 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 NUDT7P0C024 238 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms