RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PCSK2P16519 638 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 COX5AP20674 150 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 IGHV1-2P23083 117 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 PTAFRP25105 342 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 GIFP27352 417 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SHC1P29353 583 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SERPINB1P30740 379 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 ZNF83P51522 516 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 CHN2P52757 468 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 GPX6P59796 221 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 CHRNB3Q05901 458 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 FOXL1Q12952 345 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 MORF4L2Q15014 288 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 TRIP10Q15642 601 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 TMEM201Q5SNT2 666 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 TEDDM1Q5T9Z0 273 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SEL1L2Q5TEA6 688 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 C6orf163Q5TEZ5 329 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 CYP20A1Q6UW02 462 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 TMEM108Q6UXF1 575 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 Q6ZT83 130 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 FRA10AC1Q70Z53 315 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 GSTA5Q7RTV2 222 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 OR2V1Q8NHB1 315 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 UHMK1Q8TAS1 419 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 DUSP19Q8WTR2 217 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 UBE2E3Q969T4 207 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 MUCL1Q96DR8 90 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SNX18Q96RF0 628 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SRXN1Q9BYN0 137 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 KRTAP17-1Q9BYP8 105 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 XAB2Q9HCS7 855 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 MYOZ1Q9NP98 299 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 PAQR5Q9NXK6 330 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 KLHL13Q9P2N7 655 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 PRODH2Q9UF12 536 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 ING1Q9UK53 422 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SLC25A15Q9Y619 301 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 CAPN6Q9Y6Q1 641 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 IGLV3-32A0A0A0MS00 114 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 A0A1W2PR80 420 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 OR5H1A6NKK0 313 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 GMFGO60234 142 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 CCNT2O60583 730 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 BANF1O75531 89 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF17P17021 662 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 EPHA1P21709 976 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 IL12BP29460 328 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 APOBEC3AP31941 199 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 FEN1P39748 380 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 PIK3CBP42338 1070 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 TAS2R39P59534 338 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 UBA52P62987 128 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 OR4D1Q15615 310 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF239Q16600 458 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 HBMQ6B0K9 141 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 SULT1C3Q6IMI6 304 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 GRHL2Q6ISB3 625 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 FAM180BQ6P0A1 224 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 APOOLQ6UXV4 268 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 ESPNLQ6ZVH7 1005 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 MARCH3Q86UD3 253 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 NUDT13Q86X67 352 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 WDR75Q8IWA0 830 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 SYCE1Q8N0S2 351 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 TCAIMQ8N3R3 496 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 SPATA6LQ8N4H0 392 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 CEP112Q8N8E3 955 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 PDPRQ8NCN5 879 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF540Q8NDQ6 660 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 OR52N5Q8NH56 324 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 OSTF1Q92882 214 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 FBXO17Q96EF6 278 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 VSTM2LQ96N03 204 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF681Q96N22 645 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 JMJD8Q96S16 334 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 KLHDC3Q9BQ90 382 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 TRMOQ9BU70 441 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 TMEM185BQ9H7F4 350 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 PTGES2Q9H7Z7 377 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 CNOT10Q9H9A5 744 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 UNKLQ9H9P5 680 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 MED29Q9NX70 200 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 CORO1CQ9ULV4 474 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 USP22Q9UPT9 525 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 VDAC3Q9Y277 283 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 ATP23Q9Y6H3 246 aa6.71□□□□□ -1.34
SMARCE1-217ENST00000580654 BIRC6Q9NR09 4857 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 M0R1B8 84 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 ERAL1O75616 437 aaKnown RBP6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 YES1P07947 543 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 PGAM1P18669 254 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 GGT1P19440 569 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 PGCP20142 388 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 PCMT1P22061 227 aa6.7□□□□□ -1.34
SMARCE1-217ENST00000580654 PTX3P26022 381 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms