RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CAPS2Q9BXY5 557 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 CTNNAL1Q9UBT7 734 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 VWA7Q9Y334 891 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 CIB4A0PJX0 185 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 BANF1O75531 89 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 YES1P07947 543 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 COX5AP20674 150 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 ENPP1P22413 925 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 IL13RA1P78552 427 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 SLC25A3Q00325 362 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 LAPTM5Q13571 262 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 RIN1Q13671 783 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 VAX1Q5SQQ9 334 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 C9orf135Q5VTT2 229 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 GTF2IRD2BQ6EKJ0 949 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 C11orf87Q6NUJ2 197 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 RHOUQ7L0Q8 258 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 FCRLAQ7L513 359 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 C1QL2Q7Z5L3 287 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 GTF2IRD2Q86UP8 949 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 MYLK4Q86YV6 388 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 UBE2FQ969M7 185 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF300Q96RE9 604 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 LACRTQ9GZZ8 138 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 SLITRK2Q9H156 845 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 FKRPQ9H9S5 495 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 NTMQ9P121 344 aa12.24□□□□□ -0.45
CSNK1D-213ENST00000580446 POM121CA8CG34 1229 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 STK16O75716 305 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 TSPAN15O95858 294 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 GCH1P30793 250 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 SERPINF1P36955 418 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 PNLIPRP2P54317 469 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 TGFBIQ15582 683 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 ESPNLQ6ZVH7 1005 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 LMNTD2Q8IXW0 634 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 GATSQ8NAP1 163 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 ATP6V1C2Q8NEY4 427 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 PDLIM5Q96HC4 596 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 KLHL15Q96M94 604 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 LRRC1Q9BTT6 524 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 DDX31Q9H8H2 851 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 PAQR5Q9NXK6 330 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 PRODH2Q9UF12 536 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 ICAM5Q9UMF0 924 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 OR10H1Q9Y4A9 318 aa12.23□□□□□ -0.45
CSNK1D-213ENST00000580446 G3V4G9 280 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 PRKD3O94806 890 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 PRSS23O95084 383 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 PRTN3P24158 256 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 PSMA4P25789 261 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 PCGF2P35227 344 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 IDH3GP51553 393 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 IL1RL1Q01638 556 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 CSTF3Q12996 717 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 CRYMQ14894 314 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 GLYR1Q49A26 553 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 APOOLQ6UXV4 268 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 UBE2J2Q8N2K1 259 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 OR51F2Q8NH61 342 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 FAM110DQ8TAY7 271 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 POC1BQ8TC44 478 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 WDR60Q8WVS4 1066 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 LRRC58Q96CX6 371 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 VSTM2LQ96N03 204 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 CENPKQ9BS16 269 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 TMPRSS13Q9BYE2 586 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 TPK1Q9H3S4 243 aa12.22□□□□□ -0.45
CSNK1D-213ENST00000580446 SH3PXD2BA1X283 911 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 MAGEB16A2A368 324 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 TTC4O95801 387 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 ATP1B1P05026 303 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 OR4A8P0C604 315 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 PABPC4LP0CB38 370 aaKnown RBP12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 GAAP10253 952 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 DDX5P17844 614 aaKnown RBP12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 PIK3CGP48736 1102 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 RAC1P63000 192 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 TPM4P67936 248 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 CDK16Q00536 496 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 ZP4Q12836 540 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 SPA17Q15506 151 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 CCBE1Q6UXH8 406 aaPredicted RBP12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 ADAMTSL2Q86TH1 951 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 P2RY8Q86VZ1 359 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 NUDT13Q86X67 352 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 LILRA2Q8N149 483 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF786Q8N393 782 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 GTPBP8Q8N3Z3 284 aaPredicted RBP12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 WDR31Q8NA23 367 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 TRIM58Q8NG06 486 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 KLHL29Q96CT2 875 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 RAB1BQ9H0U4 201 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 G6PC2Q9NQR9 355 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 SDHAF3Q9NRP4 125 aa12.21□□□□□ -0.45
CSNK1D-213ENST00000580446 PCNX3Q9H6A9 2034 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms