RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 EEF1A1P68104 462 aaKnown RBP9.86□□□□□ -0.83
SS18-213ENST00000579640 KCNJ10P78508 379 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 KCNC4Q03721 635 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 TLE3Q04726 772 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 DEFB109BQ30KR1 87 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 AGAP7PQ5VUJ5 663 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 B3GNTL1Q67FW5 361 aaPredicted RBP9.86□□□□□ -0.83
SS18-213ENST00000579640 TMEM81Q6P7N7 255 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 ZNF836Q6ZNA1 936 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 MISPQ8IVT2 679 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 PAPD5Q8NDF8 572 aaKnown RBP9.86□□□□□ -0.83
SS18-213ENST00000579640 GPR32P1Q8NGA4 272 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 RNF138Q8WVD3 245 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 AGAP4Q96P64 663 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 SEPHS2Q99611 448 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 TBL1XR1Q9BZK7 514 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 S100A14Q9HCY8 104 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 ARMC1Q9NVT9 282 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 HPF1Q9NWY4 346 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 STMN3Q9NZ72 180 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 AURKCQ9UQB9 309 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 V9GYQ6 96 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 DOCK10Q96BY6 2186 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 CENPVL1A0A0U1RR11 272 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 CDHR4A6H8M9 788 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 TMEM8BA6NDV4 472 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 FADS1O60427 444 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 MAN1A2O60476 641 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 DNAJB5O75953 348 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 OR6B1O95007 311 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 SEMG1P04279 462 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 ERFP50548 548 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 HLCSP50747 726 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 RIPK1Q13546 671 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 TBCELQ5QJ74 424 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 ISLR2Q6UXK2 745 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 UNQ6494/PRO21346Q6UXR6 183 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 RTL4Q6ZR62 310 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 VTCN1Q7Z7D3 282 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 GRAMD2AQ8IUY3 354 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 BEST3Q8N1M1 668 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 FAM86B1Q8N7N1 296 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 ZNF614Q8N883 585 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 POGLUT1Q8NBL1 392 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 DCBLD2Q96PD2 775 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 GPR83Q9NYM4 423 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 AP4S1Q9Y587 144 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 KCNMB2Q9Y691 235 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 K7ENP7 123 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 HNRNPRO43390 633 aaKnown RBP9.85□□□□□ -0.83
SS18-213ENST00000579640 MGRN1O60291 552 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 TPST1O60507 370 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 CEACAM4O75871 244 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 IFNW1P05000 195 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 FABP3P05413 133 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 FCGR1AP12314 374 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 ITGA2P17301 1181 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 MAGEA2P43356 314 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 CYB561P49447 251 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 TMPRSS3P57727 454 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 MFAP5Q13361 173 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 SNTA1Q13424 505 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 NRF1Q16656 503 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 MRPL2Q5T653 305 aaKnown RBP9.85□□□□□ -0.83
SS18-213ENST00000579640 FNDC7Q5VTL7 733 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 INO80CQ6PI98 192 aaPredicted RBP9.85□□□□□ -0.83
SS18-213ENST00000579640 IL20RBQ6UXL0 311 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 PIWIL3Q7Z3Z3 882 aaKnown RBP9.85□□□□□ -0.83
SS18-213ENST00000579640 HMGN2P46Q86SG4 172 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 ZNF440Q8IYI8 595 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 OR10G3Q8NGC4 313 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 OR10Q1Q8NGQ4 319 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 APOBEC4Q8WW27 367 aaKnown RBP9.85□□□□□ -0.83
SS18-213ENST00000579640 PYDC1Q8WXC3 89 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 SLCO4A1Q96BD0 722 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 NODALQ96S42 347 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 ARHGDIGQ99819 225 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 UTP23Q9BRU9 249 aaKnown RBP9.85□□□□□ -0.83
SS18-213ENST00000579640 RNF32Q9H0A6 362 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 IL1RAPQ9NPH3 570 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 SDHAF3Q9NRP4 125 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 FLRT3Q9NZU0 649 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 CNIH4Q9P003 139 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 SH3GLB1Q9Y371 365 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 AKAP13Q12802 2813 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 NCOR2Q9Y618 2525 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 CPAMD8Q8IZJ3 1885 aa9.85□□□□□ -0.83
SS18-213ENST00000579640 MED19A0JLT2 244 aaPredicted RBP9.84□□□□□ -0.83
SS18-213ENST00000579640 PRAMEF25A6NGN4 478 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 NDUFB5O43674 189 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 EIF4E2O60573 245 aaKnown RBP9.84□□□□□ -0.83
SS18-213ENST00000579640 EPPINO95925 133 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 CSTAP01040 98 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 CCL11P51671 97 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 RGS8P57771 180 aaPredicted RBP9.84□□□□□ -0.83
SS18-213ENST00000579640 GLIPR1L2Q4G1C9 344 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 SLC30A6Q6NXT4 461 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 ZNF550Q7Z398 422 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 CARM1Q86X55 608 aa9.84□□□□□ -0.83
SS18-213ENST00000579640 CYP4Z2PQ8N1L4 340 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms