RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ERV3-1Q14264 604 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 SHBQ15464 509 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 SNAPC1Q16533 368 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 TIMM50Q3ZCQ8 353 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 MINDY4Q4G0A6 757 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 CWF19L1Q69YN2 538 aaKnown RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 GTF2IRD2BQ6EKJ0 949 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 SLC29A4Q7RTT9 530 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 OLIG3Q7RTU3 272 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 ZNF367Q7RTV3 350 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 PRICKLE2Q7Z3G6 844 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 GTF2IRD2Q86UP8 949 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 CCDC71Q8IV32 467 aaPredicted RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 ZNF614Q8N883 585 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 OR9Q1Q8NGQ5 310 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 WDR36Q8NI36 951 aaKnown RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 RNF217Q8TC41 542 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 DNAJA4Q8WW22 397 aaPredicted RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 APH1BQ8WW43 257 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 ZNF501Q96CX3 271 aaPredicted RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 ZG16BQ96DA0 208 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 TMEM80Q96HE8 168 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 SENP5Q96HI0 755 aaPredicted RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 CDCA4Q9BXL8 241 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 ITPAQ9BY32 194 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 NDEL1Q9GZM8 345 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 LRRN3Q9H3W5 708 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 GAREM1Q9H706 876 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 HHATLQ9HCP6 504 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 C11orf16Q9NQ32 467 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 UBQLN4Q9NRR5 601 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 LANCL2Q9NS86 450 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 MAN2C1Q9NTJ4 1040 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 TBC1D23Q9NUY8 699 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 FKBP14Q9NWM8 211 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 RARRES3Q9UL19 164 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 SLC7A7Q9UM01 511 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 BAIAP2Q9UQB8 552 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 ERGIC3Q9Y282 383 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 MAU2Q9Y6X3 613 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 FRG2CA6NGY1 282 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 UNC119BA6NIH7 251 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 CLDN24A6NM45 220 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 H3BMQ9 156 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 SCDO00767 359 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 CHP2O43745 196 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 SEMA7AO75326 666 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 PPM1BO75688 479 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 MED26O95402 600 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 FADS2O95864 444 aaKnown RBP10.3□□□□□ -0.76
SKA2-204ENST00000578519 CTSBP07858 339 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 GIMD1P0DJR0 217 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 TDGF1P13385 188 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 FOLR1P15328 257 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 MAOAP21397 527 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 SSTR4P31391 388 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 SLC5A2P31639 672 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 CSTF2P33240 577 aaKnown RBP eCLIP10.3□□□□□ -0.76
SKA2-204ENST00000578519 SOX18P35713 384 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 ADH7P40394 386 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 OMPP47874 163 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 ZNF136P52737 540 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 ST3GAL4Q11206 333 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 FGFBP1Q14512 234 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 KCNAB1Q14722 419 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 NSDHLQ15738 373 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 SYT16Q17RD7 645 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 RNLSQ5VYX0 342 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 PLAG1Q6DJT9 500 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 RHBDD2Q6NTF9 364 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 ULK3Q6PHR2 472 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 KANSL1Q7Z3B3 1105 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 BMP8AQ7Z5Y6 402 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 P2RY8Q86VZ1 359 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 METTL27Q8N6F8 245 aaPredicted RBP10.3□□□□□ -0.76
SKA2-204ENST00000578519 TCEANCQ8N8B7 351 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 ZNF615Q8N8J6 731 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 RCBTB1Q8NDN9 531 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 B3GNT7Q8NFL0 401 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 C16orf52Q8NHV5 167 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 TMEM239Q8WW34 195 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 METTL21AQ8WXB1 218 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 HSPBAP1Q96EW2 488 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 LCORQ96JN0 433 aaPredicted RBP10.3□□□□□ -0.76
SKA2-204ENST00000578519 COG8Q96MW5 612 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 FUNDC2Q9BWH2 189 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 TSSK6Q9BXA6 273 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 TGIF2Q9GZN2 237 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 CTPS2Q9NRF8 586 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 PAK1IP1Q9NWT1 392 aaPredicted RBP10.3□□□□□ -0.76
SKA2-204ENST00000578519 ENPP5Q9UJA9 477 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.3□□□□□ -0.76
SKA2-204ENST00000578519 GPR55Q9Y2T6 319 aaPredicted RBP10.3□□□□□ -0.76
SKA2-204ENST00000578519 CDH10Q9Y6N8 788 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 TMEM131Q92545 1883 aa10.3□□□□□ -0.76
SKA2-204ENST00000578519 FAM86C2PA6NEL3 165 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 SERINC4A6NH21 518 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 H3BMH7 237 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 GTPBP1O00178 669 aaKnown RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 FRS3O43559 492 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms