RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SNRPB2P08579 225 aaKnown RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 ELAVL4P26378 380 aaKnown RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 CRATP43155 626 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 KCNC4Q03721 635 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 CHRNEQ04844 493 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 CAPRIN1Q14444 709 aaKnown RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 MAPK14Q16539 360 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 PDZK1Q5T2W1 519 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 TYW3Q6IPR3 259 aaKnown RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 DHDDSQ86SQ9 333 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 OR5M9Q8NGP3 310 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 OR5M1Q8NGP8 315 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 NPAS1Q99742 590 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 CPPED1Q9BRF8 314 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 SLC39A3Q9BRY0 314 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 UBQLN4Q9NRR5 601 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 ERRFI1Q9UJM3 462 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 LEF1Q9UJU2 399 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 RPH3AQ9Y2J0 694 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 ZNF835Q9Y2P0 537 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 ARHGAP21Q5T5U3 1957 aa19.74■□□□□ 0.75
CDC42EP4-203ENST00000578516 TENM4Q6N022 2769 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 ANGPT2O15123 496 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 NDUFB5O43674 189 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 KIAA0513O60268 411 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 H6PDO95479 791 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 KRT75O95678 551 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 HPNP05981 417 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 DSTNP60981 165 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 IRX1P78414 480 aaPredicted RBP19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 BNC2Q6ZN30 1099 aaPredicted RBP19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 FJX1Q86VR8 437 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 RPRMLQ8N4K4 120 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 MAL2Q969L2 176 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 ZG16BQ96DA0 208 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 PNPLA3Q9NST1 481 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 EXD2Q9NVH0 621 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 DKKL1Q9UK85 242 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 NDUFAF1Q9Y375 327 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 WDR45Q9Y484 360 aa19.73■□□□□ 0.75
CDC42EP4-203ENST00000578516 UBR5O95071 2799 aaPredicted RBP19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 DUXAA6NLW8 204 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 CLDN24A6NM45 220 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 SCDO00767 359 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 SNX3O60493 162 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 STX11O75558 287 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 UGT2B17O75795 530 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 BCHEP06276 602 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 NGFRP08138 427 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 PTGS2P35354 604 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 ATP12AP54707 1039 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 MTPNP58546 118 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 PLAURQ03405 335 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 NFYCQ13952 458 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 EMC4Q5J8M3 183 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 ATAD3BQ5T9A4 648 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 REP15Q6BDI9 236 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 CPLX4Q7Z7G2 160 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 TREML1Q86YW5 311 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 NEIL3Q8TAT5 605 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 PHOSPHO1Q8TCT1 267 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 ZNF524Q96C55 264 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 OR2B2Q9GZK3 357 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 NSRP1Q9H0G5 558 aaKnown RBP19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 SLC38A1Q9H2H9 487 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 TMEM45AQ9NWC5 275 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 PCDHGB3Q9Y5G1 929 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 CAPN7Q9Y6W3 813 aa19.72■□□□□ 0.75
CDC42EP4-203ENST00000578516 PHF3Q92576 2039 aaKnown RBP19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 C15orf38-AP3S2A0A0A6YYH1 394 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 LOC100653049A0A140TA62 436 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 KRT34O76011 436 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 STSP08842 583 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 HPGDP15428 266 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 DPP4P27487 766 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 CA7P43166 264 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 ZNF117Q03924 483 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 RGNQ15493 299 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 KLHL26Q53HC5 615 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 CBLN3Q6UW01 205 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 ARSKQ6UWY0 536 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 MTDHQ86UE4 582 aaKnown RBP19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 ZNF619Q8N2I2 560 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 OR14L1PQ8NHC6 308 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 ACKR4Q9NPB9 350 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 QPCTLQ9NXS2 382 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 PCNX1Q96RV3 2341 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 MYO18BQ8IUG5 2567 aa19.71■□□□□ 0.75
CDC42EP4-203ENST00000578516 A0A1B0GVC2 190 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 KDM4EB2RXH2 506 aaPredicted RBP19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 FXYD1O00168 92 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 AQP7O14520 342 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 LRRTM2O43300 516 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 ZIC3O60481 467 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 CBR3O75828 277 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 AK1P00568 194 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 NR2F1P10589 423 aa19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 CLK3P49761 638 aaKnown RBP19.7■□□□□ 0.74
CDC42EP4-203ENST00000578516 RBPJQ06330 500 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms