RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 DNAJC9Q8WXX5 260 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 C7orf34Q96L11 122 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 CCNL2Q96S94 520 aaPredicted RBP22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 C6orf203Q9P0P8 240 aaPredicted RBP22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 SLC13A4Q9UKG4 626 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 ABCG2Q9UNQ0 655 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 EFSO43281 561 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 OR6B1O95007 311 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 FABP3P05413 133 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 HPGDP15428 266 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 TBXA2RP21731 343 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 LCN1P31025 176 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 KLHL26Q53HC5 615 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 RNF220Q5VTB9 566 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 JMJD6Q6NYC1 403 aaPredicted RBP22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 APOOLQ6UXV4 268 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 CARM1Q86X55 608 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 RBM45Q8IUH3 476 aaKnown RBP22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF527Q8NB42 609 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 SPACA9Q96E40 222 aaPredicted RBP22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF570Q96NI8 536 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 PKP2Q99959 881 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 DPH1Q9BZG8 443 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 DTNAQ9Y4J8 743 aa22.08■■□□□ 1.13
ATPAF1-213ENST00000574428 EXPH5Q8NEV8 1989 aa22.08■■□□□ 1.12
ATPAF1-213ENST00000574428 SCDO00767 359 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 CASQ2O14958 399 aaPredicted RBP22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 HNRNPRO43390 633 aaKnown RBP22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 NAGAP17050 411 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 MAGEA2P43356 314 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 TMED10P49755 219 aaKnown RBP22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 SSR4P51571 173 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 PLAURQ03405 335 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 EFR3AQ14156 821 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 EIPR1Q53HC9 387 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 IRAK1BP1Q5VVH5 260 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 LPCAT4Q643R3 524 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 TSEN54Q7Z6J9 526 aaKnown RBP22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 GATSQ8NAP1 163 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 AMBRA1Q9C0C7 1298 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 LHPPQ9H008 270 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 CCDC86Q9H6F5 360 aaKnown RBP22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 CDHR4A6H8M9 788 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 SYT5O00445 386 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 DIRAS1O95057 198 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 IFNW1P05000 195 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 PEX2P28328 305 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 FGFBP1Q14512 234 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 ACER2Q5QJU3 275 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 TMEM102Q8N9M5 508 aaPredicted RBP22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 OR10G3Q8NGC4 313 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 ASB15Q8WXK1 588 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 HGDQ93099 445 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 ARHGDIGQ99819 225 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 KLHL28Q9NXS3 571 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 RIMS3Q9UJD0 308 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 SLC9A8Q9Y2E8 581 aa22.07■■□□□ 1.12
ATPAF1-213ENST00000574428 SERINC4A6NH21 518 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 YAP1P46937 504 aaKnown RBP22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 RRADP55042 308 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 KCNC4Q03721 635 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 TRIP10Q15642 601 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 CD226Q15762 336 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 NRF1Q16656 503 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 NDUFAF6Q330K2 333 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 ZNF791Q3KP31 576 aaPredicted RBP22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 OPN5Q6U736 354 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 IL20RBQ6UXL0 311 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 ERMP1Q7Z2K6 904 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 AMIGO2Q86SJ2 522 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 POGLUT1Q8NBL1 392 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 OR6T1Q8NGN1 323 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 CNOT9Q92600 299 aaKnown RBP22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 NODALQ96S42 347 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 RTN4RQ9BZR6 473 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 YY1AP1Q9H869 796 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 NDUFAF4Q9P032 175 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 POLHQ9Y253 713 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 FRYQ5TBA9 3013 aa22.06■■□□□ 1.12
ATPAF1-213ENST00000574428 HOXB6P17509 224 aaKnown RBP22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 EVI2BP34910 448 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 HOXC5Q00444 222 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 RAPSNQ13702 412 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 NTRK2Q16620 822 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 IQCCQ4KMZ1 466 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 CRTC2Q53ET0 693 aaPredicted RBP22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 HMBOX1Q6NT76 420 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 NUP54Q7Z3B4 507 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 TMEM156Q8N614 296 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 ARSGQ96EG1 525 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 AGPAT4Q9NRZ5 378 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 DKK4Q9UBT3 224 aa22.05■■□□□ 1.12
ATPAF1-213ENST00000574428 A6NL46 340 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 FADS1O60427 444 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 DNAJB5O75953 348 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 NGFRP08138 427 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 FCGR1AP12314 374 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 FASP25445 335 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 RGS8P57771 180 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms