RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PRPH2P23942 346 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 TRHRP34981 398 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 CPOXP36551 454 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 GPR4P46093 362 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 GPR107Q5VW38 600 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 KLHL24Q6TFL4 600 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 CCDC103Q8IW40 242 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 NRMQ8IXM6 262 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 PACRGLQ8N7B6 248 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 OR10H4Q8NGA5 316 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 OSTF1Q92882 214 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 TMIGD2Q96BF3 282 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 OMA1Q96E52 524 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 KCNS3Q9BQ31 491 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 APMAPQ9HDC9 416 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 BOKQ9UMX3 212 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 ASB4Q9Y574 426 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 CACNA1CQ13936 2221 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 CKAP5Q14008 2032 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 ZNF264O43296 627 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 TLX2O43763 284 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 PRKNO60260 465 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 KCNK5O95279 499 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 OPN1LWP04000 364 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 TFPTP0C1Z6 253 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 NR2C1P13056 603 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 CYB561P49447 251 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 CASP6P55212 293 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 RHBDD2Q6NTF9 364 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 DNAJC22Q8N4W6 341 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 SCARF2Q96GP6 870 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 ZNF300Q96RE9 604 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 CCNL2Q96S94 520 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 FEVQ99581 238 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 DUSP22Q9NRW4 184 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 ZNF443Q9Y2A4 671 aaPredicted RBP9.4□□□□□ -0.9
SMG6-213ENST00000573166 PRR23D1E9PI22 279 aaPredicted RBP9.4□□□□□ -0.91
SMG6-213ENST00000573166 PRAMEF4O60810 478 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 DLGAP3O95886 979 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 PRR23D2P0DMB1 279 aaPredicted RBP9.4□□□□□ -0.91
SMG6-213ENST00000573166 KCNAB2Q13303 367 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 CBFBQ13951 182 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 GINS1Q14691 196 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 CLPPQ16740 277 aaPredicted RBP9.4□□□□□ -0.91
SMG6-213ENST00000573166 PRAMEF9Q5VWM5 478 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 SLC22A10Q63ZE4 541 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 DNM1P34Q6PK57 102 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 TMPRSS11AQ6ZMR5 421 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 PRSS42Q7Z5A4 293 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 CROCCP3Q8IVE0 287 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 SLITRK4Q8IW52 837 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 B3GNT7Q8NFL0 401 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 C16orf52Q8NHV5 167 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 FANK1Q8TC84 345 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 TP53INP1Q96A56 240 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 OSBPL10Q9BXB5 764 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 ZNF717Q9BY31 904 aaPredicted RBP9.4□□□□□ -0.91
SMG6-213ENST00000573166 ZNF768Q9H5H4 540 aaKnown RBP9.4□□□□□ -0.91
SMG6-213ENST00000573166 GORASP2Q9H8Y8 452 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 RXFP3Q9NSD7 469 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 SLC7A7Q9UM01 511 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 NPFFR2Q9Y5X5 522 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 PTPRDP23468 1912 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 CHD5Q8TDI0 1954 aa9.4□□□□□ -0.91
SMG6-213ENST00000573166 DCDC2BA2VCK2 349 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 TFECO14948 347 aaPredicted RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 RGS10O43665 173 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 UTS2O95399 124 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 PNLIPP16233 465 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 PEBP1P30086 187 aaKnown RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 LSSP48449 732 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 MRPL28Q13084 256 aaKnown RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 ZIC1Q15915 447 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 IQCCQ4KMZ1 466 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 LCN1P1Q5VSP4 162 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 FBXL20Q96IG2 436 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 VN1R1Q9GZP7 353 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 SLITRK2Q9H156 845 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMG6-213ENST00000573166 THADAQ6YHU6 1953 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 MTCL1Q9Y4B5 1905 aaKnown RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 ASNA1O43681 348 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 TRMUO75648 421 aaKnown RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 PDX1P52945 283 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 KIAA0040Q15053 153 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 ZNF528Q3MIS6 628 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 TIMM50Q3ZCQ8 353 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 DLEU7Q6UYE1 221 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 CBLL1Q75N03 491 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 OVCH1Q7RTY7 1134 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 ADAMTS16Q8TE57 1224 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 PNPLA2Q96AD5 504 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 ERMAPQ96PL5 475 aaPredicted RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 OR5B2Q96R09 309 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 UBAP1Q9NZ09 502 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 TSC2P49815 1807 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 GCGRP47871 477 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 CTBP2P56545 445 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 PON3Q15166 354 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms