RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 CDC42P60953 191 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 FGFBP1Q14512 234 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 MAD2L1BPQ15013 274 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-210ENST00000571613 PDZK1Q5T2W1 519 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ZNF730Q6ZMV8 503 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 RBM44Q6ZP01 1051 aaKnown RBP17.96■□□□□ 0.47
RPAIN-210ENST00000571613 LAPTM4BQ86VI4 370 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ZNF440Q8IYI8 595 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 PRSS58Q8IYP2 241 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 BMPERQ8N8U9 685 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 PIGXQ8TBF5 258 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 TMEM27Q9HBJ8 222 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 RXFP3Q9NSD7 469 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 SEMA4GQ9NTN9 838 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 SLC35A3Q9Y2D2 325 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 A0A087WUU8 490 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 NPIPA5A0A0B4J1W7 369 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 CENPVL1A0A0U1RR11 272 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 CLDN24A6NM45 220 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 IDSB3KWA1 339 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 B4E171 279 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 NPIPA7E9PJI5 369 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 MEN1O00255 615 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ALOX12BO75342 701 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 KLK3P07288 261 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-210ENST00000571613 NPIPA8P0DM63 369 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 EPHA2P29317 976 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 TSPAN7P41732 249 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 E2F1Q01094 437 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 CTU2Q2VPK5 515 aaKnown RBP17.96■□□□□ 0.47
RPAIN-210ENST00000571613 BROXQ5VW32 411 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ZNF613Q6PF04 617 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ZNF773Q6PK81 442 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 GDF7Q7Z4P5 450 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ZAR1Q86SH2 424 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 RNF113BQ8IZP6 322 aaKnown RBP17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ZNF614Q8N883 585 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 HSPBAP1Q96EW2 488 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 CMKLR1Q99788 373 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 TRIM2Q9C040 744 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 CTPS2Q9NRF8 586 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 UBQLN4Q9NRR5 601 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 IMPAD1Q9NX62 359 aa17.96■□□□□ 0.47
RPAIN-210ENST00000571613 C19orf25Q9UFG5 118 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-210ENST00000571613 ZAR1LA6NP61 321 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 SLC1A7O00341 560 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 TO15178 435 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 MRPS14O60783 128 aaKnown RBP17.95■□□□□ 0.46
RPAIN-210ENST00000571613 FUT4P22083 530 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 CHMP24386 653 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 KRT20P35900 424 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 ADH7P40394 386 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 EMP2P54851 167 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 FOXD4Q12950 439 aaPredicted RBP17.95■□□□□ 0.46
RPAIN-210ENST00000571613 EBPQ15125 230 aaKnown RBP17.95■□□□□ 0.46
RPAIN-210ENST00000571613 PTGES3Q15185 160 aaKnown RBP17.95■□□□□ 0.46
RPAIN-210ENST00000571613 ZER1Q7Z7L7 766 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 B3GNT8Q7Z7M8 397 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 P3H2Q8IVL5 708 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 ADIPOR1Q96A54 375 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 NUDT9Q9BW91 350 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 WDR54Q9H977 334 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 APMAPQ9HDC9 416 aa17.95■□□□□ 0.46
RPAIN-210ENST00000571613 HPGDP15428 266 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 OR1Q1Q15612 314 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 MBOAT2Q6ZWT7 520 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 FAM81AQ8TBF8 368 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 ATOH1Q92858 354 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-210ENST00000571613 HS6ST2Q96MM7 605 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 CDC6Q99741 560 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 STRADBQ9C0K7 418 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 CCNB1IP1Q9NPC3 277 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 REV1Q9UBZ9 1251 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 GPN3Q9UHW5 284 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-210ENST00000571613 BDP1A6H8Y1 2624 aa17.94■□□□□ 0.46
RPAIN-210ENST00000571613 SERINC4A6NH21 518 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ENDOUP21128 410 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 MMP11P24347 488 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 TTKP33981 857 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ALDH3B2P48448 385 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 IDH2P48735 452 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 EFNA3P52797 238 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 CDH15P55291 814 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 TSPAN31Q12999 210 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ANKRD37Q7Z713 158 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ENTHD1Q8IYW4 607 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ZSCAN1Q8NBB4 408 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 RHOXF1Q8NHV9 184 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 TRUB1Q8WWH5 349 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 IPCEF1Q8WWN9 437 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 NXF5Q9H1B4 397 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 DNAJB12Q9NXW2 375 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 VCANP13611 3396 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ASCC3Q8N3C0 2202 aaKnown RBP17.93■□□□□ 0.46
RPAIN-210ENST00000571613 SAGE2PA6NJ88 616 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 H3BN98 237 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 SCDO00767 359 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 ABCB7O75027 752 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 CD63P08962 238 aa17.93■□□□□ 0.46
RPAIN-210ENST00000571613 GKN3PP0CG01 181 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms