RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 KIF18BQ86Y91 864 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 NUDCD3Q8IVD9 361 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 OR5AK3PQ8NH89 298 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 FNDC9Q8TBE3 224 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 MTERF3Q96E29 417 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 ZFP3Q96NJ6 502 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 UCN2Q96RP3 112 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 PIGQQ9BRB3 760 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 CXorf36Q9H7Y0 433 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 CCM2LQ9NUG4 571 aaPredicted RBP12.4□□□□□ -0.42
RAB40B-204ENST00000571554 NTMQ9P121 344 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 PLEKHA6Q9Y2H5 1048 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 NUP214P35658 2090 aaPredicted RBP12.4□□□□□ -0.42
RAB40B-204ENST00000571554 MED13LQ71F56 2210 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 TTC36A6NLP5 189 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 RGS16O15492 202 aaPredicted RBP12.39□□□□□ -0.43
RAB40B-204ENST00000571554 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
RAB40B-204ENST00000571554 EPXP11678 715 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 SOAT1P35610 550 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 PEX19P40855 299 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 POU6F2P78424 691 aaPredicted RBP12.39□□□□□ -0.43
RAB40B-204ENST00000571554 PON3Q15166 354 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 CD226Q15762 336 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 BCL2A1Q16548 175 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 SPDYE7PQ495Y7 208 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 CPTPQ5TA50 214 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 LRIG3Q6UXM1 1119 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 CLEC4FQ8N1N0 589 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF781Q8N8C0 355 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 OR6Y1Q8NGX8 325 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 GOT1L1Q8NHS2 421 aaPredicted RBP12.39□□□□□ -0.43
RAB40B-204ENST00000571554 FAM110BQ8TC76 370 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 OPN3Q9H1Y3 402 aaPredicted RBP12.39□□□□□ -0.43
RAB40B-204ENST00000571554 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 ST6GALNAC2Q9UJ37 374 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 PACSIN3Q9UKS6 424 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 KCNE3Q9Y6H6 103 aa12.39□□□□□ -0.43
RAB40B-204ENST00000571554 IGLV3-32A0A0A0MS00 114 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 FAM221AA4D161 298 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 ALG1L2C9J202 215 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
RAB40B-204ENST00000571554 CFLARO15519 480 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 G6PDP11413 515 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 HPGDP15428 266 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 TBXA2RP21731 343 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 SERPINB5P36952 375 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 EIF1AXP47813 144 aaKnown RBP12.38□□□□□ -0.43
RAB40B-204ENST00000571554 CCT3P49368 545 aaKnown RBP12.38□□□□□ -0.43
RAB40B-204ENST00000571554 PRIM2P49643 509 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 DIO3P55073 304 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 RPS26P62854 115 aaKnown RBP12.38□□□□□ -0.43
RAB40B-204ENST00000571554 SORDQ00796 357 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.38□□□□□ -0.43
RAB40B-204ENST00000571554 PGS1Q32NB8 556 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 BTLAQ7Z6A9 289 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 GGNQ86UU5 652 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 MREGQ8N565 214 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 STARD4Q96DR4 205 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 TMEM109Q9BVC6 243 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 C20orf27Q9GZN8 174 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 PIGMQ9H3S5 423 aa12.38□□□□□ -0.43
RAB40B-204ENST00000571554 SH3D21A4FU49 640 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 A8MXE2 369 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 SCDO00767 359 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 OIP5O43482 229 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 AQP8O94778 261 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 DDX5P17844 614 aaKnown RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 RPL3P39023 403 aaKnown RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 KIR2DL2P43627 348 aaPredicted RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 SLC6A8P48029 635 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 CASP9P55211 416 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 ABCE1P61221 599 aaKnown RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 FAM27E3Q08E93 113 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 DAZAP2Q15038 168 aaPredicted RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 MLC1Q15049 377 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 SGCBQ16585 318 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 NDUFAF6Q330K2 333 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 EXOSC6Q5RKV6 272 aaKnown RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 CDC73Q6P1J9 531 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 CLECL1Q8IZS7 167 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 OR5D16Q8NGK9 328 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 OR5P2Q8WZ92 322 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 PGM2Q96G03 612 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 DUSP26Q9BV47 211 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 BTBD2Q9BX70 525 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 KCNK9Q9NPC2 374 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 UBQLN4Q9NRR5 601 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 MED17Q9NVC6 651 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 ATAD3AQ9NVI7 634 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 CLEC4AQ9UMR7 237 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 EIF3LQ9Y262 564 aaKnown RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 AP4B1Q9Y6B7 739 aa12.37□□□□□ -0.43
RAB40B-204ENST00000571554 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
RAB40B-204ENST00000571554 TNFRSF21O75509 655 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 SERPINE1P05121 402 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms