RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MOAP1Q96BY2 351 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ECHDC3Q96DC8 303 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 RSPRY1Q96DX4 576 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ASB9Q96DX5 294 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 OMA1Q96E52 524 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MOCOSQ96EN8 888 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 IMP4Q96G21 291 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 CDKN2AIPNLQ96HQ2 116 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 DNAJC1Q96KC8 554 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 LMLNQ96KR4 655 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 C3orf30Q96M34 536 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TGS1Q96RS0 853 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 DIRC2Q96SL1 478 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 VAT1Q99536 393 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ABHD6Q9BV23 337 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SCNM1Q9BWG6 230 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 JAM3Q9BX67 310 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ASPNQ9BXN1 380 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MS4A7Q9GZW8 240 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 SIRPDQ9H106 197 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SLC25A51Q9H1U9 297 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SLC38A1Q9H2H9 487 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 LINC00597Q9H2U6 94 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 DPEP2Q9H4A9 486 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TLE6Q9H808 572 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SLCO1B3Q9NPD5 702 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CHST11Q9NPF2 352 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MKKSQ9NPJ1 570 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 SLAMF7Q9NQ25 335 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 POT1Q9NUX5 634 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FGFR1OP2Q9NVK5 253 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 RDH8Q9NYR8 311 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 USE1Q9NZ43 259 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ADA2Q9NZK5 511 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 BFARQ9NZS9 450 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TXNDC16Q9P2K2 825 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 LHX3Q9UBR4 397 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PISDQ9UG56 409 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FBXL7Q9UJT9 491 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ACSL6Q9UKU0 697 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 EMCNQ9ULC0 261 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SCML1Q9UN30 329 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FLVCR2Q9UPI3 526 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CMAHPQ9Y471 501 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TCAF1Q9Y4C2 921 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PCDHGB1Q9Y5G3 927 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 OR51B4Q9Y5P0 310 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ARL5AQ9Y689 179 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ADAMTS9Q9P2N4 1935 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PCDH15Q96QU1 1955 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CHD7Q9P2D1 2997 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 LAMA2P24043 3122 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 NINQ8N4C6 2090 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TRAV19A0A0A6YYK7 116 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 A0A0J9YVX5 310 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 A0A1B0GW15 77 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SCO2A0A1W2PP80 73 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 A0A1W2PRX2 142 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SMCO3A2RU48 225 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 MAGEA13PA6NCF6 341 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 FABP12A6NFH5 140 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 MBD3L5A6NJ08 208 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 ZNF98A6NK75 572 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SERPINE3A8MV23 424 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 C5orf67F2Z3F1 127 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 KLRC4-KLRK1H3BQV0 150 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TRIM77I1YAP6 450 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 KLF11O14901 512 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CTDSPLO15194 276 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 LINC01565O15544 149 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 HSPA12AO43301 675 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 LDB2O43679 373 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ITM2AO43736 263 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SSX4O60224 188 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 NME2P1O60361 137 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SDC3O75056 442 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SLC25A12O75746 678 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ANXA9O76027 345 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 VAPBO95292 243 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 H6PDO95479 791 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 GSRP00390 522 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 C1RP00736 705 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 GRPP07492 148 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CHRNGP07510 517 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ERCC1P07992 297 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 FCGR2AP12318 317 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CEACAM1P13688 526 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CD36P16671 472 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ZNF7P17097 686 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 FBLP22087 321 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 ARRB2P32121 409 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 THBS2P35442 1172 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 NUDT1P36639 197 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TGFBR2P37173 567 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 VHLP40337 213 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 OMPP47874 163 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms