RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 BCAS2O75934 225 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 SLU7O95391 586 aaKnown RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 ADAP00813 363 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 GFAPP14136 432 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 CSNK2A2P19784 350 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 TAC1P20366 129 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 ME2P23368 584 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 TTKP33981 857 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 EVI2BP34910 448 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 ARL1P40616 181 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 PDLIM4P50479 330 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 FABP6P51161 128 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 EFNA4P52798 201 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 PNLIPRP2P54317 469 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 PSPHP78330 225 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 DEFA6Q01524 100 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 CHRNB3Q05901 458 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 DLG1Q12959 904 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 CUL3Q13618 768 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 PPA1Q15181 289 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 UAP1Q16222 522 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 ERCC6LQ2NKX8 1250 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 PRICKLE4Q2TBC4 344 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 PAGE2Q7Z2X7 111 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 SLC22A9Q8IVM8 553 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 WDR75Q8IWA0 830 aaKnown RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 L3MBTL4Q8NA19 623 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 OR2M3Q8NG83 312 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 OR10D3Q8NH80 312 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 EFHD2Q96C19 240 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 SLC35A4Q96G79 324 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 POTEKPQ9BYX7 375 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 ROPN1BQ9BZX4 212 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 ROPN1Q9HAT0 212 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 AHSPQ9NZD4 102 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 MAT2BQ9NZL9 334 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 GPR55Q9Y2T6 319 aaPredicted RBP9.85□□□□□ -0.83
VPS53-207ENST00000570510 ZNF780BQ9Y6R6 833 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 PMF1-BGLAPU3KQ54 211 aa9.85□□□□□ -0.83
VPS53-207ENST00000570510 A0A0G2JK05 382 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 SHISA9B4DS77 424 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 POC1B-GALNT4F8VUJ3 575 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 CXCL13O43927 109 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 ATP1B1P05026 303 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 KLK1P06870 262 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 NUDT17P0C025 328 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 EPORP19235 508 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 AGTR1P30556 359 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 ITGADQ13349 1161 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 P2RY6Q15077 328 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 CPSF6Q16630 551 aaKnown RBP eCLIP9.84□□□□□ -0.83
VPS53-207ENST00000570510 GLYR1Q49A26 553 aaPredicted RBP9.84□□□□□ -0.83
VPS53-207ENST00000570510 GGTA1PQ4G0N0 100 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 TRMT12Q53H54 448 aaKnown RBP9.84□□□□□ -0.83
VPS53-207ENST00000570510 CCNYL2Q5T2Q4 361 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 BHLHA15Q7RTS1 189 aaPredicted RBP9.84□□□□□ -0.83
VPS53-207ENST00000570510 CROCCP2Q86T23 111 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 FADS6Q8N9I5 356 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 UHMK1Q8TAS1 419 aaKnown RBP9.84□□□□□ -0.83
VPS53-207ENST00000570510 DUSP19Q8WTR2 217 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 ZFAND2BQ8WV99 257 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 KLHL29Q96CT2 875 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 DHRS9Q9BPW9 319 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 BHLHE41Q9C0J9 482 aaPredicted RBP9.84□□□□□ -0.83
VPS53-207ENST00000570510 VPS11Q9H270 941 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 ZBTB26Q9HCK0 441 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 FKBP7Q9Y680 259 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 MGAM2Q2M2H8 2515 aa9.84□□□□□ -0.83
VPS53-207ENST00000570510 DYSFO75923 2080 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 C1orf226A1L170 272 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 UBXN8O00124 270 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TSPAN2O60636 221 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 GCM2O75603 506 aaPredicted RBP9.83□□□□□ -0.84
VPS53-207ENST00000570510 SEMA3DO95025 777 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 OPN1LWP04000 364 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 PCSK2P16519 638 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 GCAP28676 217 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 CCT5P48643 541 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 ALDH9A1P49189 494 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 EMDP50402 254 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 MAPK12P53778 367 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 MRPS35P82673 323 aaKnown RBP9.83□□□□□ -0.84
VPS53-207ENST00000570510 SCGB2A2Q13296 93 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 PFKFB4Q16877 469 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.83□□□□□ -0.84
VPS53-207ENST00000570510 CCDC153Q494R4 210 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 SH2D4BQ5SQS7 431 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TEX35Q5T0J7 233 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 HBMQ6B0K9 141 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 MFSD12Q6NUT3 480 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TMEM108Q6UXF1 575 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 SSX8Q7RTT4 187 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 SLC44A2Q8IWA5 706 aaPredicted RBP9.83□□□□□ -0.84
VPS53-207ENST00000570510 GABRG1Q8N1C3 465 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 MREGQ8N565 214 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TEX9Q8N6V9 391 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 C1GALT1C1Q96EU7 318 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 SERPINI1Q99574 410 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TMEM109Q9BVC6 243 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms