RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 DCST2Q5T1A1 773 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 AAGABQ6PD74 315 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 SPATA19Q7Z5L4 167 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 ADGRE4PQ86SQ3 457 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 ANKRD46Q86W74 232 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 CLEC4FQ8N1N0 589 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 GATSQ8NAP1 163 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 RELL2Q8NC24 303 aaPredicted RBP11.8□□□□□ -0.52
CNOT1-220ENST00000569916 OR5D16Q8NGK9 328 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 OR4A15Q8NGL6 344 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 PIWIL2Q8TC59 973 aaKnown RBP11.8□□□□□ -0.52
CNOT1-220ENST00000569916 ADAMTS15Q8TE58 950 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 ZNF75CPQ92670 426 aaPredicted RBP11.8□□□□□ -0.52
CNOT1-220ENST00000569916 OR7D2Q96RA2 312 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 SH3GL2Q99962 352 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 SPOCK3Q9BQ16 436 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 TUBA1CQ9BQE3 449 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 PTGES2Q9H7Z7 377 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 KCNJ16Q9NPI9 418 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 UBQLN4Q9NRR5 601 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 GPR45Q9Y5Y3 372 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 FBN2P35556 2912 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 PRSS51A0A1B0GVH4 220 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 A0A1W2PQD3 144 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 C9JVG2 144 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 NDUFB5O43674 189 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 GMFGO60234 142 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 IL12AP29459 219 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 ZNF136P52737 540 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 NME5P56597 212 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 UFM1P61960 85 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 CD226Q15762 336 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 SLC25A35Q3KQZ1 300 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 SLC9B1Q4ZJI4 515 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 ANXA8L1Q5VT79 327 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 RAET1LQ5VY80 246 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 BHLHB9Q6PI77 547 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 POMZP3Q6PJE2 187 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 MEX3BQ6ZN04 569 aaKnown RBP11.79□□□□□ -0.52
CNOT1-220ENST00000569916 HDXQ7Z353 690 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 C6orf120Q7Z4R8 191 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 C9orf106Q8NAJ2 232 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 SLC35G5Q96KT7 338 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 RUBCNLQ9H714 662 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 VIPAS39Q9H9C1 493 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 CALHM2Q9HA72 323 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 ARGLU1Q9NWB6 273 aaPredicted RBP11.79□□□□□ -0.52
CNOT1-220ENST00000569916 CLCF1Q9UBD9 225 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 PCDHGB4Q9UN71 923 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 ADGRG4Q8IZF6 3080 aa11.79□□□□□ -0.52
CNOT1-220ENST00000569916 MED12LQ86YW9 2145 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 TEX15Q9BXT5 2789 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 PKDREJQ9NTG1 2253 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 NPIPA5A0A0B4J1W7 369 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 OR2M5A3KFT3 312 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 CLCA1A8K7I4 914 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 NPIPA7E9PJI5 369 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 NPIPB9F8W1W9 429 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 SCDO00767 359 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 HCRTR2O43614 444 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 SOX30O94993 753 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 CPSF4O95639 269 aaKnown RBP11.78□□□□□ -0.52
CNOT1-220ENST00000569916 IL2RAP01589 272 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 NPIPA8P0DM63 369 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 ATP6V1C1P21283 382 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 MATN1P21941 496 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 UQCRC2P22695 453 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 S100A3P33764 101 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 DGKQP52824 942 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 BCL2A1Q16548 175 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 TMEM44Q2T9K0 475 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 GLYR1Q49A26 553 aaPredicted RBP11.78□□□□□ -0.52
CNOT1-220ENST00000569916 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
CNOT1-220ENST00000569916 NXNQ6DKJ4 435 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 ARSKQ6UWY0 536 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 PLXDC2Q6UX71 529 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 GDF7Q7Z4P5 450 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 VPS37AQ8NEZ2 397 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 OR5M1Q8NGP8 315 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 GOT1L1Q8NHS2 421 aaPredicted RBP11.78□□□□□ -0.52
CNOT1-220ENST00000569916 MIPOL1Q8TD10 442 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 MARK4Q96L34 752 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 C7orf26Q96N11 449 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 OR52B2Q96RD2 323 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 UCN2Q96RP3 112 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 KLHDC3Q9BQ90 382 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 PIGQQ9BRB3 760 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 HHATLQ9HCP6 504 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 BTNL2Q9UIR0 455 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 ZNF337Q9Y3M9 751 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 USH1CQ9Y6N9 552 aa11.78□□□□□ -0.52
CNOT1-220ENST00000569916 INTS1Q8N201 2190 aaKnown RBP11.78□□□□□ -0.52
CNOT1-220ENST00000569916 APCP25054 2843 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 SHISA8B8ZZ34 492 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 LINC01387J3KSC0 135 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 DVL2O14641 736 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 PGRP06401 933 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms