RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 LSM2Q9Y333 95 aaKnown RBP5.34□□□□□ -1.55
CDH13-213ENST00000569454 UGT2A1Q9Y4X1 527 aa5.34□□□□□ -1.55
CDH13-213ENST00000569454 MTCH2Q9Y6C9 303 aa5.34□□□□□ -1.55
CDH13-213ENST00000569454 NOTCH2Q04721 2471 aa5.34□□□□□ -1.56
CDH13-213ENST00000569454 CHD7Q9P2D1 2997 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 FBN2P35556 2912 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 MN1Q10571 1320 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 C2CD3Q4AC94 2353 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 A0A075B6Q4 140 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 LOC100506127A0A0U1RQW1 187 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CDHR4A6H8M9 788 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 TLCD2A6NGC4 264 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CPSF4LA6NMK7 179 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 FAM227AF5H4B4 570 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 LOC110117498-PIK3R3F6TDL0 507 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ST8SIA5O15466 376 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 KLF4O43474 513 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 TLX2O43763 284 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 AKAP8O43823 692 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 FGF17O60258 216 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 OR10H2O60403 315 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 BRINP1O60477 761 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 PRAMEF2O60811 474 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SULT1C4O75897 302 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 NKX2-2O95096 273 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 RCBTB2O95199 551 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SNX4O95219 450 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 NSA2O95478 260 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 IL1AP01583 271 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 STATHP02808 62 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CSF2P04141 144 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 TP53P04637 393 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 EIF2S1P05198 315 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 HSMCR30P0CW71 290 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 GAAP10253 952 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ALPPL2P10696 532 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CDH3P22223 829 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CFL1P23528 166 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 GRK5P34947 590 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 MAP3K8P41279 467 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 OMPP47874 163 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 AVPR1BP47901 424 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 MTNR1AP48039 350 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 PDX1P52945 283 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 LIMK1P53667 647 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 DEFA1P59665 94 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 DEFA3P59666 94 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 LSM3P62310 102 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 RACK1P63244 317 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 SIM1P81133 766 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 SHC2P98077 582 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 EFNB1P98172 346 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 BDH1Q02338 343 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 RUNX1T1Q06455 604 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF155Q12901 538 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 TDGQ13569 410 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SERTAD2Q14140 314 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 GAS6Q14393 721 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 INAQ16352 499 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 DUSP5Q16690 384 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 TSTQ16762 297 aaKnown RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 PRICKLE4Q2TBC4 344 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 PRTGQ2VWP7 1150 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 PGGHGQ32M88 737 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF750Q32MQ0 723 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SPANXN2Q5MJ10 180 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 NXNL2Q5VZ03 156 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 TMEM236Q5W0B7 351 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF836Q6ZNA1 936 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF550Q7Z398 422 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 GDF7Q7Z4P5 450 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF438Q7Z4V0 828 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF554Q86TJ5 538 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ATCAYQ86WG3 371 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 VRK2Q86Y07 508 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 GALNT12Q8IXK2 581 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF440Q8IYI8 595 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SLC34A3Q8N130 599 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CENPSQ8N2Z9 138 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 NANOGP1Q8N7R0 232 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 POGLUT1Q8NBL1 392 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 PSD4Q8NDX1 1056 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 JPH3Q8WXH2 748 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 PIK3R3Q92569 461 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 AP3S1Q92572 193 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 CDS1Q92903 461 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 UCN3Q969E3 161 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ITPKCQ96DU7 683 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 MVB12AQ96EY5 273 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SLC35A4Q96G79 324 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SHDQ96IW2 340 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF582Q96NG8 517 aaPredicted RBP5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF285Q96NJ3 590 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 OPALINQ96PE5 141 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 FCRL4Q96PJ5 515 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 NELL2Q99435 816 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 SDF2Q99470 211 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 MACROD1Q9BQ69 325 aa5.33□□□□□ -1.56
CDH13-213ENST00000569454 ZNF559Q9BR84 538 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms