RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 GTF2A2P52657 109 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 EPHA5P54756 1037 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 NDUFA6P56556 154 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ENPP2Q13822 863 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TMIGD1Q6UXZ0 262 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF705AQ6ZN79 300 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 IL17RCQ8NAC3 791 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 OR4K17Q8NGC6 315 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 HPSE2Q8WWQ2 592 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SMDT1Q9H4I9 107 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 EMCNQ9ULC0 261 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SYT5O00445 386 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CYTIPO60759 359 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 NT5EP21589 574 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PDX1P52945 283 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SAXO2Q658L1 398 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 S100A7AQ86SG5 101 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 RNF180Q86T96 592 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SAT2Q96F10 170 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 HMCESQ96FZ2 354 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 FAM46AQ96IP4 442 aaKnown RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SLC2A13Q96QE2 648 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TBX5Q99593 518 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 NMNAT2Q9BZQ4 307 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TGIF2Q9GZN2 237 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ATG10Q9H0Y0 220 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 NRIP3Q9NQ35 241 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 C1orf167Q5SNV9 1468 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TRAV20A0A0B4J274 112 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 NDUFB2O95178 105 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SSTR2P30874 369 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ELFN2Q5R3F8 820 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SLC18B1Q6NT16 456 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 LYPD4Q6UWN0 246 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 UCN3Q969E3 161 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 B3GAT2Q9NPZ5 323 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PIGVQ9NUD9 493 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CACFD1Q9UGQ2 172 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SMIM28A0A1B0GU29 152 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ARL5CA6NH57 179 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NUDT21O43809 227 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 C6orf47O95873 294 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MMP3P08254 477 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ITPKBP27987 946 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PBX2P40425 430 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CLCNKAP51800 687 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TSPAN31Q12999 210 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 AGTRAPQ6RW13 159 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 DPY19L4Q7Z388 723 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NETO2Q8NC67 525 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CPPED1Q9BRF8 314 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MTHFD2LQ9H903 347 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 EXOSC3Q9NQT5 275 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ACSS2Q9NR19 701 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 DUS2Q9NX74 493 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 REV1Q9UBZ9 1251 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 C1orf226A1L170 272 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 KHNYNO15037 678 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TSPAN3O60637 253 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PRAMEF11O60813 436 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TBL1XO60907 577 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 KCNJ13O60928 360 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MMP2P08253 660 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 GP2P55259 537 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SOX10P56693 466 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 C1QTNF8P60827 252 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MGAT3Q09327 533 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF852Q6ZMS4 543 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NLRC3Q7RTR2 1065 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CMTM1Q8IZ96 169 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 DUSP18Q8NEJ0 188 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PROKR1Q8TCW9 393 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SLC6A7Q99884 636 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TAS2R5Q9NYW4 299 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SLC17A6Q9P2U8 582 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 EVLQ9UI08 416 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 RCE1Q9Y256 329 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 A0A1W2PQ45 241 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 A0A1W2PQY0 241 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ACSM4P0C7M7 580 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 C1GALT1C1LP0DN25 315 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CPT2P23786 658 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MAT1AQ00266 395 aaKnown RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 RING1Q06587 406 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 BATFQ16520 125 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 FAM182AQ5T1J6 154 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 APOOLQ6UXV4 268 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 LAX1Q8IWV1 398 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF619Q8N2I2 560 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF808Q8N4W9 903 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 TRAM1L1Q8N609 369 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 HAS2Q92819 552 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 CCNL2Q96S94 520 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-216ENST00000569240 GALNT9Q9HCQ5 603 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 ACKR4Q9NPB9 350 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 SDHAF3Q9NRP4 125 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 PRODH2Q9UF12 536 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 MOKQ9UQ07 419 aa6.72□□□□□ -1.33
CNOT1-216ENST00000569240 NIPSNAP2O75323 286 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms