RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 KLHL13Q9P2N7 655 aa10.36□□□□□ -0.75
CLK3-222ENST00000568232 STOML1Q9UBI4 398 aa10.36□□□□□ -0.75
CLK3-222ENST00000568232 ANGPTL3Q9Y5C1 460 aa10.36□□□□□ -0.75
CLK3-222ENST00000568232 TEX264Q9Y6I9 313 aa10.36□□□□□ -0.75
CLK3-222ENST00000568232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLK3-222ENST00000568232 NBEAL2Q6ZNJ1 2754 aa10.36□□□□□ -0.75
CLK3-222ENST00000568232 A0A0A6YYJ9 748 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 C9JVG2 144 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 SLCO1B7G3V0H7 640 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 DNALI1O14645 258 aaPredicted RBP10.35□□□□□ -0.75
CLK3-222ENST00000568232 SEMA3DO95025 777 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 PSMA4P25789 261 aaKnown RBP10.35□□□□□ -0.75
CLK3-222ENST00000568232 SHC1P29353 583 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 RFX3P48380 749 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 CARD18P57730 90 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 RAC1P63000 192 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 MRPS22P82650 360 aaKnown RBP10.35□□□□□ -0.75
CLK3-222ENST00000568232 PSG6Q00889 435 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 DLG1Q12959 904 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 CSTF3Q12996 717 aaKnown RBP10.35□□□□□ -0.75
CLK3-222ENST00000568232 ZNF239Q16600 458 aaKnown RBP10.35□□□□□ -0.75
CLK3-222ENST00000568232 TIMM23BQ5SRD1 257 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 TMEM108Q6UXF1 575 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 Q6ZT83 130 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 ISCA2Q86U28 154 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 KCTD4Q8WVF5 259 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 RNF145Q96MT1 663 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 SORCS2Q96PQ0 1159 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 CDK15Q96Q40 435 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 ATOH8Q96SQ7 321 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 KLHDC3Q9BQ90 382 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 ZNF696Q9H7X3 374 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 PFDN4Q9NQP4 134 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 ABCG2Q9UNQ0 655 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 PCDHGB1Q9Y5G3 927 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 ZNF780BQ9Y6R6 833 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 PMF1-BGLAPU3KQ54 211 aa10.35□□□□□ -0.75
CLK3-222ENST00000568232 CMYA5Q8N3K9 4069 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 IGLV3-32A0A0A0MS00 114 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 LOC390937A0A1W2PQ73 354 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 A0A1W2PR80 420 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 J3QL48 77 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 BCAS2O75934 225 aaPredicted RBP10.34□□□□□ -0.75
CLK3-222ENST00000568232 CLDN9O95484 217 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 ANGPTL1O95841 491 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 YES1P07947 543 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 DHRS4L1P0CG22 281 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 MTHFD2P13995 350 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 ZNF17P17021 662 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 GGT1P19440 569 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 IGHV1-2P23083 117 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 CD40P25942 277 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 SFTPDP35247 375 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 ZNF75DP51815 510 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 CHRNEQ04844 493 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 CHRNB3Q05901 458 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 LGALS3BPQ08380 585 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 ACAP2Q15057 778 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 PDCD2Q16342 344 aaPredicted RBP10.34□□□□□ -0.75
CLK3-222ENST00000568232 ERCC6LQ2NKX8 1250 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 AWAT1Q58HT5 328 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 ZNF544Q6NX49 715 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 COMMD6Q7Z4G1 85 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 PEG10Q86TG7 708 aaKnown RBP10.34□□□□□ -0.75
CLK3-222ENST00000568232 RETREG3Q86VR2 466 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 TDRPQ86YL5 185 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 PLD6Q8N2A8 252 aaKnown RBP10.34□□□□□ -0.75
CLK3-222ENST00000568232 METTL4Q8N3J2 472 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 GTPBP8Q8N3Z3 284 aaPredicted RBP10.34□□□□□ -0.75
CLK3-222ENST00000568232 ANKS4BQ8N8V4 417 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 OR7G2Q8NG99 324 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 OR52N5Q8NH56 324 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 STAG3L4Q8TBR4 150 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 ZNF675Q8TD23 568 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 FAM216AQ8WUB2 273 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 REXO5Q96IC2 774 aaKnown RBP10.34□□□□□ -0.75
CLK3-222ENST00000568232 INPP5KQ9BT40 448 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 C1QTNF6Q9BXI9 259 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 IPPKQ9H8X2 491 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 FAM120CQ9NX05 1096 aaKnown RBP10.34□□□□□ -0.75
CLK3-222ENST00000568232 ADAM29Q9UKF5 820 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 UTS2RQ9UKP6 389 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 PSME2Q9UL46 239 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 MGAT4BQ9UQ53 548 aa10.34□□□□□ -0.75
CLK3-222ENST00000568232 IGHV3-15A0A0B4J1V0 119 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 NPIPA5A0A0B4J1W7 369 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 NPIPA7E9PJI5 369 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 M0R1B8 84 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 PRKD3O94806 890 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 PGM3O95394 542 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 PABPC4LP0CB38 370 aaKnown RBP10.33□□□□□ -0.76
CLK3-222ENST00000568232 NPIPA8P0DM63 369 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 BMP4P12644 408 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 STMN1P16949 149 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 PTAFRP25105 342 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 CLK3P49761 638 aaKnown RBP10.33□□□□□ -0.76
CLK3-222ENST00000568232 PSPHP78330 225 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 C17orf67Q0P5P2 114 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 ZNF155Q12901 538 aaPredicted RBP10.33□□□□□ -0.76
CLK3-222ENST00000568232 GTF2H2Q13888 395 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms