RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, human

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KARS-208	ENST00000566772		A0A1W2PR80	420 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	ESYT2	A0FGR8	921 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	FBLL1	A6NHQ2	334 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	ZNF195	O14628	629 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	DNALI1	O14645	258 aa	Predicted RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	SURF4	O15260	269 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	LCMT2	O60294	686 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	TOX	O94900	526 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	NADK	O95544	446 aa	Predicted RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	ECD	O95905	644 aa	Predicted RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	OAS1	P00973	400 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	ATP1A1	P05023	1023 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	RPLP0	P05388	317 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	IGKV5-2	P06315	115 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	NGFR	P08138	427 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	BRCC3	P46736	316 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	ABCE1	P61221	599 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	RPL23A	P62750	156 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.98	□□□□□ -1.61	3e-6	■■■■■ 41.9
KARS-208	ENST00000566772	CCL15	Q16663	113 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	KIAA1644	Q3SXP7	199 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	GTDC1	Q4AE62	458 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	C1orf185	Q5T7R7	199 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	PRAMEF20	Q5VT98	475 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	RHBDD2	Q6NTF9	364 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	LEG1	Q6P5S2	330 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	C9orf47	Q6ZRZ4	202 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	OR10G8	Q8NGN5	311 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	OR52J3	Q8NH60	311 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	FBXO25	Q8TCJ0	367 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	OPTN	Q96CV9	577 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	RASD2	Q96D21	266 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	GIMAP5	Q96F15	307 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	COQ2	Q96H96	371 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	ZNF778	Q96MU6	729 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	CPXM1	Q96SM3	734 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	RPP25	Q9BUL9	199 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	PINK1	Q9BXM7	581 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	KRTAP9-3	Q9BYQ3	159 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	IL1RL2	Q9HB29	575 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	UTP6	Q9NYH9	597 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	KLRF1	Q9NZS2	232 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	CDH9	Q9ULB4	789 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	WDR45	Q9Y484	360 aa		4.98	□□□□□ -1.61
KARS-208	ENST00000566772	MKI67	P46013	3256 aa	Known RBP	4.98	□□□□□ -1.61
KARS-208	ENST00000566772	GREB1L	Q9C091	1923 aa	Predicted RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	TRIOBP	Q9H2D6	2365 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	FAM240B	A0A1B0GVZ2	78 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	NEDD8-MDP1	E9PL57	170 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	EI24	O14681	340 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	CASK	O14936	926 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	CACNG3	O60359	315 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	RANBP6	O60518	1105 aa	Known RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	FRAT2	O75474	233 aa	Predicted RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	B3GAT3	O94766	335 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	ADORA3	P0DMS8	318 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	PNMT	P11086	282 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	FGF3	P11487	239 aa	Predicted RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	ANXA3	P12429	323 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	PAX1	P15863	534 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	NCK1	P16333	377 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	GPR183	P32249	361 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	CDKN2A	P42771	156 aa	Known RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	MAGEA5	P43359	124 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	ZFP36L2	P47974	494 aa	Known RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	FNTA	P49354	379 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	PGF	P49763	221 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	ART1	P52961	327 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	SUCLG1	P53597	346 aa	Known RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	OSTN	P61366	133 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	CHI3L2	Q15782	390 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	KCNIP4	Q6PIL6	250 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	FIP1L1	Q6UN15	594 aa	Known RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	SH2D5	Q6ZV89	423 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	NECAB1	Q8N987	351 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	SYT14	Q8NB59	555 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	ICA1L	Q8NDH6	482 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	OR9Q2	Q8NGE9	314 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	SMAP2	Q8WU79	429 aa	Predicted RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	FAM3C	Q92520	227 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	TM9SF4	Q92544	642 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	DLX4	Q92988	240 aa	Predicted RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	ART4	Q93070	314 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	C18orf25	Q96B23	403 aa	Predicted RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	ELMO2	Q96JJ3	720 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	AMDHD1	Q96NU7	426 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	TGM7	Q96PF1	710 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	PITPNM3	Q9BZ71	974 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	CD209	Q9NNX6	404 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	PIPOX	Q9P0Z9	390 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	GNG12	Q9UBI6	72 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	PURG	Q9UJV8	347 aa	Known RBP	4.97	□□□□□ -1.61
KARS-208	ENST00000566772	STK36	Q9NRP7	1315 aa		4.97	□□□□□ -1.61
KARS-208	ENST00000566772	KIAA0100	Q14667	2235 aa	Known RBP	4.96	□□□□□ -1.62
KARS-208	ENST00000566772	SERTM2	A0A1B0GWG4	89 aa		4.96	□□□□□ -1.62
KARS-208	ENST00000566772	PCP4L1	A6NKN8	68 aa		4.96	□□□□□ -1.62
KARS-208	ENST00000566772	FAM74A7	A6NL05	159 aa		4.96	□□□□□ -1.62
KARS-208	ENST00000566772	TMCO5B	A8MYB1	307 aa		4.96	□□□□□ -1.62

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