RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 INHBBP09529 407 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 NEFHP12036 1026 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 ZNF17P17021 662 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 TBXA2RP21731 343 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 EIF1AXP47813 144 aaKnown RBP10.73□□□□□ -0.69
UBR1-206ENST00000566493 CTBP2P56545 445 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 KIAA0040Q15053 153 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 ACKR1Q16570 336 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 EXOC3L2Q2M3D2 409 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 APOOLQ6UXV4 268 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 SH2D5Q6ZV89 423 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 FAM214BQ7L5A3 538 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 ZNF550Q7Z398 422 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 EXOC3L1Q86VI1 746 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 LRRC75A-AS1Q8N1F1 130 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 OR6Y1Q8NGX8 325 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 ZNF764Q96H86 408 aaPredicted RBP10.73□□□□□ -0.69
UBR1-206ENST00000566493 MS4A4EQ96PG1 132 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 TSSK3Q96PN8 268 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 PIP5K1AQ99755 562 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 CCT7Q99832 543 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 TNFRSF12AQ9NP84 129 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 MCTS1Q9ULC4 181 aaKnown RBP10.73□□□□□ -0.69
UBR1-206ENST00000566493 CCL27Q9Y4X3 112 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 VPS13CQ709C8 3753 aa10.73□□□□□ -0.69
UBR1-206ENST00000566493 FAM171A2A8MVW0 826 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 DEFB108AA8MXU0 73 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 SHISA8B8ZZ34 492 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ALG1L2C9J202 215 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 NPIPB8E9PQR5 432 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 SCDO00767 359 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 TBX19O60806 448 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 OXSR1O95747 527 aaPredicted RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 CGAP01215 116 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 SHBGP04278 402 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 NGFRP08138 427 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ALOX5P09917 674 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 KRT4P19013 534 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ASMTP46597 345 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 SERPINB4P48594 390 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 PRIM2P49643 509 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ZNF41P51814 821 aaPredicted RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 RPL38P63173 70 aaKnown RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 LTBQ06643 244 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 TMEM44Q2T9K0 475 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 Q5PR19 223 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 PDSS1Q5T2R2 415 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ANKRD34AQ69YU3 496 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ZCCHC12Q6PEW1 402 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 FIGNL1Q6PIW4 674 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 C20orf204Q6ZNR8 217 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 R3HCC1LQ7Z5L2 792 aaKnown RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 GALNT10Q86SR1 603 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 CXorf67Q86X51 503 aaPredicted RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 TDRPQ86YL5 185 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 C10orf107Q8IVU9 208 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 GSPT2Q8IYD1 628 aaKnown RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 COX18Q8N8Q8 333 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 OR6K3Q8NGY3 331 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 FBXO30Q8TB52 745 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 CAVIN3Q969G5 261 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ZBTB8AQ96BR9 441 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 CHMP6Q96FZ7 201 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 GMPPAQ96IJ6 420 aaPredicted RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 CCL19Q99731 98 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 TRMOQ9BU70 441 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 C12orf65Q9H3J6 166 aaKnown RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 UBQLN4Q9NRR5 601 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 ACSS1Q9NUB1 689 aaPredicted RBP10.72□□□□□ -0.69
UBR1-206ENST00000566493 TMED5Q9Y3A6 229 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 PTGDR2Q9Y5Y4 395 aa10.72□□□□□ -0.69
UBR1-206ENST00000566493 SIAH2O43255 324 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 TRIM13O60858 407 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 AQP8O94778 261 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 KCNK2O95069 426 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 HSPA4LO95757 839 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 LINC00032P0C843 101 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 PPP3CBP16298 524 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 SDC1P18827 310 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 ME2P23368 584 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 LCN1P31025 176 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 HPCAL1P37235 193 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 MAP3K8P41279 467 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 SLC18A2Q05940 514 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 GUSBP1Q15486 140 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.71□□□□□ -0.69
UBR1-206ENST00000566493 GALNTL6Q49A17 601 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 RFTN2Q52LD8 501 aaPredicted RBP10.71□□□□□ -0.69
UBR1-206ENST00000566493 CPTPQ5TA50 214 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 GTF2IRD2BQ6EKJ0 949 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 MFSD12Q6NUT3 480 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 CLEC9AQ6UXN8 241 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 RNF165Q6ZSG1 346 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 Q6ZSR9 355 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 Q71RC1 249 aaPredicted RBP10.71□□□□□ -0.69
UBR1-206ENST00000566493 GTF2IRD2Q86UP8 949 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 GGNQ86UU5 652 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 STK32CQ86UX6 486 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 MISPQ8IVT2 679 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 DDIASQ8IXT1 998 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms