RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 SPIBQ01892 262 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 ATP1A4Q13733 1029 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 FGFBP1Q14512 234 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 NPTX1Q15818 432 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 CYP4Z1Q86W10 505 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 ZNF527Q8NB42 609 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 PIP5K1AQ99755 562 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 REEP1Q9H902 201 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 U3KQV3 271 aa28.14■■■□□ 2.09
CTCF-203ENST00000566078 HS6ST1O60243 411 aa28.13■■■□□ 2.09
CTCF-203ENST00000566078 ZNF354AO60765 605 aaPredicted RBP28.13■■■□□ 2.09
CTCF-203ENST00000566078 ICOSLGO75144 302 aa28.13■■■□□ 2.09
CTCF-203ENST00000566078 LIFP15018 202 aa28.13■■■□□ 2.09
CTCF-203ENST00000566078 GANABQ14697 944 aaKnown RBP28.13■■■□□ 2.09
CTCF-203ENST00000566078 DESI1Q6ICB0 168 aa28.13■■■□□ 2.09
CTCF-203ENST00000566078 ADAMTS17Q8TE56 1095 aa28.13■■■□□ 2.09
CTCF-203ENST00000566078 KLK13Q9UKR3 277 aa28.13■■■□□ 2.09
CTCF-203ENST00000566078 ADAMDEC1O15204 470 aa28.12■■■□□ 2.09
CTCF-203ENST00000566078 PPM1BO75688 479 aa28.12■■■□□ 2.09
CTCF-203ENST00000566078 OXSR1O95747 527 aaPredicted RBP28.12■■■□□ 2.09
CTCF-203ENST00000566078 HPGDP15428 266 aa28.12■■■□□ 2.09
CTCF-203ENST00000566078 SLC22A8Q8TCC7 542 aa28.12■■■□□ 2.09
CTCF-203ENST00000566078 C9orf16Q9BUW7 83 aa28.12■■■□□ 2.09
CTCF-203ENST00000566078 COQ10BQ9H8M1 238 aa28.12■■■□□ 2.09
CTCF-203ENST00000566078 SAMHD1Q9Y3Z3 626 aaKnown RBP28.12■■■□□ 2.09
CTCF-203ENST00000566078 HEATR5AQ86XA9 2040 aa28.12■■■□□ 2.09
CTCF-203ENST00000566078 TRABD2BA6NFA1 517 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 PDLIM1O00151 329 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 SCDO00767 359 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 PEX1O43933 1283 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 DPM1O60762 260 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 BCAS1O75363 584 aaPredicted RBP28.11■■■□□ 2.09
CTCF-203ENST00000566078 OR2J2O76002 312 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 ICAM2P13598 275 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 TMEM179BQ7Z7N9 219 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 ZNF605Q86T29 641 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 OIT3Q8WWZ8 545 aa28.11■■■□□ 2.09
CTCF-203ENST00000566078 ZBTB20Q9HC78 741 aaPredicted RBP28.11■■■□□ 2.09
CTCF-203ENST00000566078 SERINC4A6NH21 518 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 OR6C70A6NIJ9 312 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 UGT2B11O75310 529 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 SEMA7AO75326 666 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 ITGAMP11215 1152 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 TBXA2RP21731 343 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 CDH12P55289 794 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 PLAURQ03405 335 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 KLHL26Q53HC5 615 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 VASH2Q86V25 355 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 KBTBD2Q8IY47 623 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 OR5K1Q8NHB7 308 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 SOCS2O14508 198 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 HOXC5Q00444 222 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 Q0VFX4 171 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 IZUMO2Q6UXV1 221 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 ZBTB49Q6ZSB9 765 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 CMIPQ8IY22 773 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 SVOPLQ8N434 492 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 CBR4Q8N4T8 237 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 CNOT9Q92600 299 aaKnown RBP28.1■■■□□ 2.09
CTCF-203ENST00000566078 RHCGQ9UBD6 479 aa28.1■■■□□ 2.09
CTCF-203ENST00000566078 FFAR1O14842 300 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 DNAJA1P31689 397 aaKnown RBP28.09■■■□□ 2.09
CTCF-203ENST00000566078 EFR3AQ14156 821 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 ZSWIM7Q19AV6 140 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 GALNT4Q8N4A0 578 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 SDCCAG3Q96C92 435 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 IP6K3Q96PC2 410 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 RASL10BQ96S79 203 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 EPYCQ99645 322 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 SLC29A1Q99808 456 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 VCXQ9H320 206 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 DNAJB12Q9NXW2 375 aaKnown RBP28.09■■■□□ 2.09
CTCF-203ENST00000566078 LYVE1Q9Y5Y7 322 aa28.09■■■□□ 2.09
CTCF-203ENST00000566078 AKAP13Q12802 2813 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 G3V2T6 193 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 AP3D1O14617 1153 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 GKN3PP0CG01 181 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 FBXW4P57775 412 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 FCRLBQ6BAA4 426 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 SHQ1Q6PI26 577 aaKnown RBP28.08■■■□□ 2.09
CTCF-203ENST00000566078 RANBP3LQ86VV4 465 aaPredicted RBP28.08■■■□□ 2.09
CTCF-203ENST00000566078 ZDHHC13Q8IUH4 622 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 GRAMD2AQ8IUY3 354 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 HS3ST5Q8IZT8 346 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 GATSQ8NAP1 163 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 PRRC1Q96M27 445 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 PRR14Q9BWN1 585 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 EVA1AQ9H8M9 152 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 CTPS2Q9NRF8 586 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 ACAD8Q9UKU7 415 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 A4GNTQ9UNA3 340 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 MAGED1Q9Y5V3 778 aaPredicted RBP28.08■■■□□ 2.09
CTCF-203ENST00000566078 EML6Q6ZMW3 1958 aa28.08■■■□□ 2.09
CTCF-203ENST00000566078 TNFRSF11BO00300 401 aa28.07■■■□□ 2.08
CTCF-203ENST00000566078 TPST2O60704 377 aa28.07■■■□□ 2.08
CTCF-203ENST00000566078 ITGA10O75578 1167 aa28.07■■■□□ 2.08
CTCF-203ENST00000566078 CSTAP01040 98 aa28.07■■■□□ 2.08
CTCF-203ENST00000566078 NAGAP17050 411 aa28.07■■■□□ 2.08
CTCF-203ENST00000566078 FPR1P21462 350 aa28.07■■■□□ 2.08
CTCF-203ENST00000566078 TMED10P49755 219 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms