RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 UBL4AP11441 157 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 RAB5BP61020 215 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 HYAL4Q2M3T9 481 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 ZNF704Q6ZNC4 412 aaPredicted RBP12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 ZNF765Q7L2R6 523 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 TSPYL5Q86VY4 417 aaPredicted RBP12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 TMEM40Q8WWA1 233 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 RAB9BQ9NP90 201 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 IL26Q9NPH9 171 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 IGSF5Q9NSI5 407 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 WDR37Q9Y2I8 494 aa12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 AK6Q9Y3D8 172 aaKnown RBP12.83□□□□□ -0.35
CX3CL1-204ENST00000565912 DDCP20711 480 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 HOXA11P31270 313 aaPredicted RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 ALDH3B2P48448 385 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 MEX3BQ6ZN04 569 aaKnown RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 OR7G3Q8NG95 312 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 OR4D6Q8NGJ1 314 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 OR5W2Q8NH69 310 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 SLC9B1P1A6NJY1 282 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 XCR1P46094 333 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 MEX3DQ86XN8 651 aaKnown RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 CHDHQ8NE62 594 aaPredicted RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 CEBPBP17676 345 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 GABRR1P24046 479 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 ALDH3B1P43353 468 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 RGS6P49758 472 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 LYSMD4Q5XG99 296 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 LETMD1Q6P1Q0 360 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 SGPP2Q8IWX5 399 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 PNPLA1Q8N8W4 532 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 TOE1Q96GM8 510 aaKnown RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 RTP3Q9BQQ7 232 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 A0A1W2PQL4 384 aaPredicted RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 PLSCR5A0PG75 271 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 CSNK1A1P48729 337 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 ZNF423Q2M1K9 1284 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 SLC22A10Q63ZE4 541 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 LRRTM3Q86VH5 581 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 ZC3H3Q8IXZ2 948 aaKnown RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 DCUN1D4Q92564 292 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 RSC1A1Q92681 617 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 TRMT2BQ96GJ1 504 aaKnown RBP12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 RLIMQ9NVW2 624 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 SCN11AQ9UI33 1791 aa12.83□□□□□ -0.36
CX3CL1-204ENST00000565912 SEC61A1P61619 476 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 CHRNEQ04844 493 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 SCGB2A2Q13296 93 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 GPR50Q13585 617 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 PTPRRQ15256 657 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 SMAD2Q15796 467 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 LCN8Q6JVE9 175 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 TMEM239Q8WW34 195 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 CNOT9Q92600 299 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 TBC1D20Q96BZ9 403 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 HCAR1Q9BXC0 346 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 EDARQ9UNE0 448 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 TSPAN15O95858 294 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 PTGER1P34995 402 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 GLO1Q04760 184 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 CLLU1OSQ5K130 101 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 KIAA1211LQ6NV74 962 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 TMEM184AQ6ZMB5 413 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 SLC25A18Q9H1K4 315 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 DMRT3Q9NQL9 472 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 EIF3FO00303 357 aaPredicted RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 LCKP06239 509 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 TIMP2P16035 220 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 CHRNB4P30926 498 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 FBXO46Q6PJ61 603 aaPredicted RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 KCTD20Q7Z5Y7 419 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 PDZD3Q86UT5 571 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 OR10A5Q9H207 317 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 OR10A2Q9H208 303 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 ZFP57Q9NU63 452 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 DCNP07585 359 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 CX3CR1P49238 355 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 ERVK-25P63136 954 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 SELENOWP63302 87 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 COQ5Q5HYK3 327 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 ELP2Q6IA86 826 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 LCTLQ6UWM7 567 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 ABHD12BQ7Z5M8 362 aaPredicted RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 MCATQ8IVS2 390 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 WDSUB1Q8N9V3 476 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 OR52E1Q8NGJ3 308 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 OR4K15Q8NH41 348 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 OR51Q1Q8NH59 317 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 GPR148Q8TDV2 347 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 IL1F10Q8WWZ1 152 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 CDS1Q92903 461 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 SENP5Q96HI0 755 aaPredicted RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 PINK1Q9BXM7 581 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 POLHQ9Y253 713 aa12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 AHDC1Q5TGY3 1603 aaPredicted RBP12.82□□□□□ -0.36
CX3CL1-204ENST00000565912 ANKRD34BA5PLL1 514 aa12.81□□□□□ -0.36
CX3CL1-204ENST00000565912 NME4O00746 187 aa12.81□□□□□ -0.36
CX3CL1-204ENST00000565912 SC5DO75845 299 aa12.81□□□□□ -0.36
CX3CL1-204ENST00000565912 SLC22A5O76082 557 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms