RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 HBMQ6B0K9 141 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 GTF2IRD2BQ6EKJ0 949 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ALKBH2Q6NS38 261 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 MFSD12Q6NUT3 480 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 PAMR1Q6UXH9 720 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ZCCHC23Q6ZST2 131 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 FAM214BQ7L5A3 538 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 GTF2IRD2Q86UP8 949 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 TRABD2AQ86V40 505 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 NUDCD3Q8IVD9 361 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 P3H2Q8IVL5 708 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 LILRA2Q8N149 483 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 RIBC1Q8N443 379 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 FNDC5Q8NAU1 212 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ATP6V1C2Q8NEY4 427 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 OR7A2PQ8NGA2 310 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 OR6Y1Q8NGX8 325 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 OR10D3Q8NH80 312 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 B4GALNT2Q8NHY0 566 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 FAM110BQ8TC76 370 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 PHOSPHO1Q8TCT1 267 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 NUDT8Q8WV74 236 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 RNF138Q8WVD3 245 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 OR5P2Q8WZ92 322 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 TUBGCP3Q96CW5 907 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 MBD6Q96DN6 1003 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 REXO5Q96IC2 774 aaKnown RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 RNF145Q96MT1 663 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 MS4A4EQ96PG1 132 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 C1orf50Q9BV19 199 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 TMUB1Q9BVT8 246 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 BTBD2Q9BX70 525 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ROPN1BQ9BZX4 212 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 HOXD1Q9GZZ0 328 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 PIGUQ9H490 435 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 RNF122Q9H9V4 155 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ROPN1Q9HAT0 212 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 PLSCR4Q9NRQ2 329 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ATAD3AQ9NVI7 634 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 GIN1Q9NXP7 522 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 C6orf203Q9P0P8 240 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 GIMAP2Q9UG22 337 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ATP6V1HQ9UI12 483 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ZDHHC2Q9UIJ5 367 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 MCTS1Q9ULC4 181 aaKnown RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 CLEC4AQ9UMR7 237 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 PCDHGB4Q9UN71 923 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 EMC9Q9Y3B6 208 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ZNF175Q9Y473 711 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 CNTRLQ7Z7A1 2325 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 NOTCH2Q04721 2471 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 IGLV3-32A0A0A0MS00 114 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 NPIPB8E9PQR5 432 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ZNF195O14628 629 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 TNFSF11O14788 317 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ARHGEF9O43307 516 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 CTIFO43310 598 aaKnown RBP5.76□□□□□ -1.49
TCF4-228ENST00000565393 SMPD2O60906 423 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 SKAP2O75563 359 aaPredicted RBP5.76□□□□□ -1.49
TCF4-228ENST00000565393 SOX30O94993 753 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 HSPA4LO95757 839 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 C6orf47O95873 294 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 CGAP01215 116 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 IFI6P09912 130 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 CD8BP10966 210 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 FCGR2AP12318 317 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 PRPS1L1P21108 318 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 LCN1P31025 176 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 SOAT1P35610 550 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 MAP3K8P41279 467 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 FRKP42685 505 aaPredicted RBP5.76□□□□□ -1.49
TCF4-228ENST00000565393 SLC6A8P48029 635 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 FOXD4Q12950 439 aaPredicted RBP5.76□□□□□ -1.49
TCF4-228ENST00000565393 PDE7AQ13946 482 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 LASP1Q14847 261 aaKnown RBP5.76□□□□□ -1.49
TCF4-228ENST00000565393 MLC1Q15049 377 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ACKR1Q16570 336 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.76□□□□□ -1.49
TCF4-228ENST00000565393 C6orf136Q5SQH8 315 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 RNF165Q6ZSG1 346 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ZNF550Q7Z398 422 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ZAR1Q86SH2 424 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 MISPQ8IVT2 679 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 NATD1Q8N6N6 113 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 METTL25Q8N6Q8 603 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ZNF614Q8N883 585 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ZNF527Q8NB42 609 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 OR2V1Q8NHB1 315 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 RFWD2Q8NHY2 731 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ACTRT2Q8TDY3 377 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ROBO4Q8WZ75 1007 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 CDS1Q92903 461 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 PIGTQ969N2 578 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ZBTB8AQ96BR9 441 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 ZBTB9Q96C00 473 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 FAM120BQ96EK7 910 aaKnown RBP5.76□□□□□ -1.49
TCF4-228ENST00000565393 GIMAP5Q96F15 307 aa5.76□□□□□ -1.49
TCF4-228ENST00000565393 GMPPAQ96IJ6 420 aaPredicted RBP5.76□□□□□ -1.49
TCF4-228ENST00000565393 FCRL1Q96LA6 429 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms