RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TIFABQ6ZNK6 161 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 ESPNLQ6ZVH7 1005 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 IKBIPQ70UQ0 350 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 GALNT10Q86SR1 603 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 FAM76AQ8TAV0 307 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 AKAP1Q92667 903 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDR2-204ENST00000564542 HOXB13Q92826 284 aaPredicted RBP12.6□□□□□ -0.39
CDR2-204ENST00000564542 ZBTB8AQ96BR9 441 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 LAMP3Q9UQV4 416 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 USF3Q68DE3 2245 aa12.6□□□□□ -0.39
CDR2-204ENST00000564542 EXOC1LA0A1B0GW35 172 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 TNFSF11O14788 317 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 NDUFB5O43674 189 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 CXCL13O43927 109 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 OXSR1O95747 527 aaPredicted RBP12.59□□□□□ -0.39
CDR2-204ENST00000564542 TUBBP07437 444 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 PSMA4P25789 261 aaKnown RBP12.59□□□□□ -0.39
CDR2-204ENST00000564542 ECHS1P30084 290 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 AGTR1P30556 359 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 FOXA1P55317 472 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 RAC1P63000 192 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 ZNF844Q08AG5 666 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 VEZF1Q14119 521 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 SLC29A2Q14542 456 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 IMPG1Q17R60 797 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 CLEC12BQ2HXU8 276 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 PLPPR5Q32ZL2 321 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 ADAM5Q6NVV9 412 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 MMGT1Q8N4V1 131 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 OR2V1Q8NHB1 315 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 PIK3R3Q92569 461 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 SLC9A6Q92581 669 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 ANP32BQ92688 251 aaKnown RBP12.59□□□□□ -0.39
CDR2-204ENST00000564542 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 MID1IP1Q9NPA3 183 aa12.59□□□□□ -0.39
CDR2-204ENST00000564542 POLR3HQ9Y535 204 aaPredicted RBP12.59□□□□□ -0.39
CDR2-204ENST00000564542 ANK3Q12955 4377 aaKnown RBP12.59□□□□□ -0.39
CDR2-204ENST00000564542 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
CDR2-204ENST00000564542 A0A1W2PRB8 838 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 OVOL3O00110 214 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 RSL1D1O76021 490 aaKnown RBP12.58□□□□□ -0.4
CDR2-204ENST00000564542 NKX2-2O95096 273 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 ME2P23368 584 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 MAP3K8P41279 467 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 ZNF41P51814 821 aaPredicted RBP12.58□□□□□ -0.4
CDR2-204ENST00000564542 HSPB3Q12988 150 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 VPS26BQ4G0F5 336 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 HBMQ6B0K9 141 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 HEPHL1Q6MZM0 1159 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 TRIM46Q7Z4K8 759 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 STEAP2Q8NFT2 490 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 RAB3IL1Q8TBN0 382 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 GPR151Q8TDV0 419 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 ACTRT2Q8TDY3 377 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 S100PBPQ96BU1 408 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 RNF145Q96MT1 663 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 NPAS1Q99742 590 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 TACO1Q9BSH4 297 aaKnown RBP12.58□□□□□ -0.4
CDR2-204ENST00000564542 C12orf49Q9H741 205 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 TMEM185BQ9H7F4 350 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 EQTNQ9NQ60 294 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 MED17Q9NVC6 651 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 RNF115Q9Y4L5 304 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 RTTNQ86VV8 2226 aa12.58□□□□□ -0.4
CDR2-204ENST00000564542 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 UBFD1O14562 309 aaKnown RBP12.57□□□□□ -0.4
CDR2-204ENST00000564542 OPN1LWP04000 364 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 PRPS2P11908 318 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 GCAP28676 217 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 SLC18A2Q05940 514 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
CDR2-204ENST00000564542 PDSS1Q5T2R2 415 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 CPTPQ5TA50 214 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 GTF2IRD2BQ6EKJ0 949 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 MFSD12Q6NUT3 480 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 NOXRED1Q6NXP6 359 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 ZNF551Q7Z340 670 aaPredicted RBP12.57□□□□□ -0.4
CDR2-204ENST00000564542 GTF2IRD2Q86UP8 949 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 EXOC3L1Q86VI1 746 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 MISPQ8IVT2 679 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 GABRG1Q8N1C3 465 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
CDR2-204ENST00000564542 CDRT4Q8N9R6 151 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 GATSQ8NAP1 163 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 OR4C3Q8NH37 302 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
CDR2-204ENST00000564542 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 IFT81Q8WYA0 676 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 FBXW5Q969U6 566 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
CDR2-204ENST00000564542 ZNF764Q96H86 408 aaPredicted RBP12.57□□□□□ -0.4
CDR2-204ENST00000564542 KLHL15Q96M94 604 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 HDHD5Q9BXW7 423 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 SNX8Q9Y5X2 465 aa12.57□□□□□ -0.4
CDR2-204ENST00000564542 CR1P17927 2039 aa12.56□□□□□ -0.4
CDR2-204ENST00000564542 A0A0J9YW62 118 aa12.56□□□□□ -0.4
CDR2-204ENST00000564542 H3BQF6 201 aa12.56□□□□□ -0.4
CDR2-204ENST00000564542 PDPK1O15530 556 aa12.56□□□□□ -0.4
CDR2-204ENST00000564542 GCM2O75603 506 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms