RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 OR56B2PQ8NGI1 322 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 PELI1Q96FA3 418 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 PIWIL1Q96J94 861 aaKnown RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 CHCHD5Q9BSY4 110 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 SYT11Q9BT88 431 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 NFKBIZQ9BYH8 718 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 WWOXQ9NZC7 414 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 AIPL1Q9NZN9 384 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 WRAP73Q9P2S5 460 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 PCSK1NQ9UHG2 260 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 RASD1Q9Y272 281 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 USP16Q9Y5T5 823 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 AUP1Q9Y679 476 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 USP6P35125 1406 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 MSH4O15457 936 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TPST2O60704 377 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TRIM3O75382 744 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 H2BFMP0C1H6 154 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 HPCAL1P37235 193 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 ACTR3P61158 418 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 IRX1P78414 480 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 PLOD1Q02809 727 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 COX10Q12887 443 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 C1orf61Q13536 156 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 MXD4Q14582 209 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 LAGE3Q14657 143 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 PVRIGQ6DKI7 326 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 FAHD2BQ6P2I3 314 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 WDSUB1Q8N9V3 476 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 OR10A7Q8NGE5 316 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TBCKQ8TEA7 893 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TADA1Q96BN2 335 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 FAHD2AQ96GK7 314 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 PARD6BQ9BYG5 372 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 JPT2Q9H910 190 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 FANCFQ9NPI8 374 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 EXOSC3Q9NQT5 275 aaKnown RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 ELOVL2Q9NXB9 296 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 EHFQ9NZC4 300 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 BARX2Q9UMQ3 279 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 NTNG1Q9Y2I2 539 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 FRMPD4Q14CM0 1322 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 FAM240BA0A1B0GVZ2 78 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 TSC22D2O75157 780 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 TRIM49P0CI25 452 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 TRIM49CP0CI26 452 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 PVRP15151 417 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 SDC1P18827 310 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ZNF10P21506 573 aaPredicted RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 OR1D4P47884 311 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 NOVA1P51513 510 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 ARHGDIAP52565 204 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 GSTO1P78417 241 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 BDH1Q02338 343 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ACY1Q03154 408 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 RGS1Q08116 209 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ELAVL2Q12926 359 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 CYP51A1Q16850 503 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ZNF506Q5JVG8 444 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 WSCD1Q658N2 575 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ZSCAN25Q6NSZ9 544 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 CCBE1Q6UXH8 406 aaPredicted RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 KIAA1328Q86T90 577 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 CATSPER3Q86XQ3 398 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 OR5D13Q8NGL4 314 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 CNIH3Q8TBE1 160 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 SLC39A3Q9BRY0 314 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 NIPSNAP3BQ9BS92 247 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 MCRIP2Q9BUT9 160 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 HCAR1Q9BXC0 346 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 CRNKL1Q9BZJ0 848 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 POLDIP2Q9Y2S7 368 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 MRPL11Q9Y3B7 192 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 KDM6BO15054 1643 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 A0A1W2PPR1 153 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 RPL37AP8A6NKH3 93 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 PCP4L1A6NKN8 68 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 SNTNA6NMZ2 147 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 FAM220BPB1ANY3 271 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 SLC17A2O00624 439 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 NBR2O15453 112 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ZNF208O43345 1280 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 SRPX2O60687 465 aaPredicted RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 SCGNO76038 276 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 MELTFP08582 738 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 DBTP11182 482 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 HSD17B1P14061 328 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 PCMT1P22061 227 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 MMP11P24347 488 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 CAPGP40121 348 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 CCT3P49368 545 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 CCNA1P78396 465 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 RIPPLY1Q0D2K3 151 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ZNF154Q13106 437 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 C10orf120Q5SQS8 335 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 LGSNQ5TDP6 509 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 ZC2HC1BQ5TFG8 222 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 TMUB2Q71RG4 321 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 C16orf62Q7Z3J2 963 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms