RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 BARX1Q9HBU1 254 aaPredicted RBP9.17□□□□□ -0.94
SF3B3-204ENST00000563739 CISD1Q9NZ45 108 aaKnown RBP9.17□□□□□ -0.94
SF3B3-204ENST00000563739 XPR1Q9UBH6 696 aa9.17□□□□□ -0.94
SF3B3-204ENST00000563739 LPAR3Q9UBY5 353 aa9.17□□□□□ -0.94
SF3B3-204ENST00000563739 DMGDHQ9UI17 866 aaKnown RBP9.17□□□□□ -0.94
SF3B3-204ENST00000563739 UTS2RQ9UKP6 389 aa9.17□□□□□ -0.94
SF3B3-204ENST00000563739 VDAC3Q9Y277 283 aa9.17□□□□□ -0.94
SF3B3-204ENST00000563739 C7orf72A4D263 438 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 OIP5O43482 229 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 LMX1BO60663 402 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 IL33O95760 270 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 ANGPTL1O95841 491 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 C2P06681 752 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 TUBBP07437 444 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 GFAPP14136 432 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 EGR1P18146 543 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 SRD5A1P18405 259 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 COX5AP20674 150 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 CFPP27918 469 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 ALDH9A1P49189 494 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 HTR6P50406 440 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 NUDT6P53370 316 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 CTBP2P56545 445 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 PRR5P85299 388 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 ZNF155Q12901 538 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-204ENST00000563739 ERCC6LQ2NKX8 1250 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 TUSC5Q8IXB3 177 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 PTGR2Q8N8N7 351 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-204ENST00000563739 RNF145Q96MT1 663 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 TACO1Q9BSH4 297 aaKnown RBP9.16□□□□□ -0.94
SF3B3-204ENST00000563739 SHARPINQ9H0F6 387 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 EML4Q9HC35 981 aaKnown RBP9.16□□□□□ -0.94
SF3B3-204ENST00000563739 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 ZDHHC18Q9NUE0 388 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.16□□□□□ -0.94
SF3B3-204ENST00000563739 PRSS50Q9UI38 385 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 SLC12A4Q9UP95 1085 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 ANGPTL3Q9Y5C1 460 aa9.16□□□□□ -0.94
SF3B3-204ENST00000563739 V9GYY5 206 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-204ENST00000563739 A0A1W2PRB8 838 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 H7C417 338 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 UPK1AO00322 258 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 SPRY1O43609 319 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 UTS2O95399 124 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 ADAP00813 363 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 PGRP06401 933 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 SLC25A16P16260 332 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 TSPAN8P19075 237 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 ECHS1P30084 290 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 SPRP35270 261 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 TRA2BP62995 288 aaKnown RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 ILF2Q12905 390 aaKnown RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 CSTF3Q12996 717 aaKnown RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 SGCBQ16585 318 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 NRF1Q16656 503 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 SGO1Q5FBB7 561 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 GRTP1Q5TC63 336 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 PPP4R4Q6NUP7 873 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 PAGE2Q7Z2X7 111 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 MTERF4Q7Z6M4 381 aaKnown RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 TBC1D1Q86TI0 1168 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 CCDC25Q86WR0 208 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 BANPQ8N9N5 519 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 ZNF483Q8TF39 744 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 SLC9A6Q92581 669 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 EXOSC8Q96B26 276 aaKnown RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 MTBPQ96DY7 904 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 LMF2Q9BU23 707 aaKnown RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 CXorf36Q9H7Y0 433 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 CHODLQ9H9P2 273 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 MED17Q9NVC6 651 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 CPSF2Q9P2I0 782 aaKnown RBP9.15□□□□□ -0.94
SF3B3-204ENST00000563739 KLHL13Q9P2N7 655 aa9.15□□□□□ -0.94
SF3B3-204ENST00000563739 IGHV4-61A0A0C4DH41 118 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 SYCE1LA8MT33 242 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 ABCD4O14678 606 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 BCAS2O75934 225 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 LYZL6O75951 148 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 KLHL2O95198 593 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 PGM3O95394 542 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 OXSR1O95747 527 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 PLGP00747 810 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 LINGO3P0C6S8 592 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 ITGA2P17301 1181 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 IGHV1-2P23083 117 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 CRABP2P29373 138 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 TTKP33981 857 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 MAGEA12P43365 314 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 FOXG1P55316 489 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 RAC1P63000 192 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 PSPHP78330 225 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 FOXF1Q12946 379 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 ACAP2Q15057 778 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 CD226Q15762 336 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 CYP27C1Q4G0S4 372 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 EXOSC6Q5RKV6 272 aaKnown RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 SH2D4BQ5SQS7 431 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 CYB5R2Q6BCY4 276 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 METTL2BQ6P1Q9 378 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms