RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	TXNDC16	Q9P2K2	825 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	STOML1	Q9UBI4	398 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	PCTP	Q9UKL6	214 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	UTS2R	Q9UKP6	389 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	CAD	P27708	2225 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	PCNX3	Q9H6A9	2034 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	EIF3H	O15372	352 aa	Known RBP eCLIP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	KCNAB3	O43448	404 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	SPRY1	O43609	319 aa	Predicted RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	SLITRK5	O94991	958 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	PGM3	O95394	542 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	NGFR	P08138	427 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	GSTA2	P09210	222 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	IFI6	P09912	130 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	GFAP	P14136	432 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	USF1	P22415	310 aa	Predicted RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	TTK	P33981	857 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	MAP3K8	P41279	467 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	C21orf58	P58505	322 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	IRF9	Q00978	393 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	DR1	Q01658	176 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	STX5	Q13190	355 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	ITGAD	Q13349	1161 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	RNPS1	Q15287	305 aa	Known RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	ZNF239	Q16600	458 aa	Known RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	FAM83E	Q2M2I3	478 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	ERCC6L	Q2NKX8	1250 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	GTF2IRD2B	Q6EKJ0	949 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092		Q6ZT83	130 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	RAPH1	Q70E73	1250 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	NUFIP2	Q7Z417	695 aa	Known RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	GTF2IRD2	Q86UP8	949 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	POC1B	Q8TC44	478 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	ACTRT2	Q8TDY3	377 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	PYROXD1	Q8WU10	500 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	KISS1R	Q969F8	398 aa	Predicted RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	MTBP	Q96DY7	904 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	RADIL	Q96JH8	1075 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	ADAD1	Q96M93	576 aa	Known RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	CACNG6	Q9BXT2	260 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	PRRG4	Q9BZD6	226 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	SHCBP1L	Q9BZQ2	653 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	FARSB	Q9NSD9	589 aa	Known RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	CBLN4	Q9NTU7	201 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	NPAP1	Q9NZP6	1156 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	KLHL13	Q9P2N7	655 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	ING1	Q9UK53	422 aa	Predicted RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	C19orf53	Q9UNZ5	99 aa	Predicted RBP	7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	SLC12A4	Q9UP95	1085 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	OR10H1	Q9Y4A9	318 aa		7.36	□□□□□ -1.23
CKLF-208	ENST00000563092	PKD1L1	Q8TDX9	2849 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	MYO1G	B0I1T2	1018 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	ALG1L2	C9J202	215 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092		E7EQL1	145 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	STX16-NPEPL1	H3BU86	382 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	UBFD1	O14562	309 aa	Known RBP	7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	STX16	O14662	325 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	TNFSF11	O14788	317 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	LILRA1	O75019	489 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	KLHL2	O95198	593 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	SYNGR4	O95473	234 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	NTN1	O95631	604 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	ANGPTL1	O95841	491 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	ADA	P00813	363 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	PDYN	P01213	254 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	IGKV1D-16	P01601	117 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	C2	P06681	752 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	CSF3	P09919	207 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	PABPC4L	P0CB38	370 aa	Known RBP	7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	COX5A	P20674	150 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	IL32	P24001	234 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	CFP	P27918	469 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	GZMK	P49863	264 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	CCNG1	P51959	295 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	MANF	P55145	182 aa	Known RBP	7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	CDH11	P55287	796 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	RAE1	P78406	368 aa	Known RBP	7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	CSTF3	Q12996	717 aa	Known RBP	7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	IFT88	Q13099	833 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	SQLE	Q14534	574 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	DECR1	Q16698	335 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	PLPPR5	Q32ZL2	321 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	TECRL	Q5HYJ1	363 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	TIMM23B	Q5SRD1	257 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	CPTP	Q5TA50	214 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	LGSN	Q5TDP6	509 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	LIPN	Q5VXI9	398 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	FAM166A	Q6J272	317 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	LETMD1	Q6P1Q0	360 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	GALNT18	Q6P9A2	607 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092		Q6ZSR9	355 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	C3orf62	Q6ZUJ4	267 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	TRABD2A	Q86V40	505 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	P2RY8	Q86VZ1	359 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	LRRC8A	Q8IWT6	810 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	DEPDC4	Q8N2C3	294 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	ZNF619	Q8N2I2	560 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	OR2L13	Q8N349	312 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	RFLNB	Q8N5W9	214 aa		7.35	□□□□□ -1.23
CKLF-208	ENST00000563092	C1orf52	Q8N6N3	182 aa	Known RBP	7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms