RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 BUB1O43683 1085 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 RANBP6O60518 1105 aaKnown RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 LYPD3O95274 346 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 APBB3O95704 486 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ECDO95905 644 aaPredicted RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 P0C879 139 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 PTPN4P29074 926 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 MAT2AP31153 395 aaKnown RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 PITPNBP48739 271 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 P2RY4P51582 365 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 METAP1P53582 386 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 HAND2P61296 217 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ARF5P84085 180 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 GALK2Q01415 458 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF85Q03923 595 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 PPP1R8Q12972 351 aaKnown RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 SLC39A6Q13433 755 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ASAH1Q13510 395 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 SERTAD2Q14140 314 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ZIC1Q15915 447 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 CLPPQ16740 277 aaPredicted RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 DNAJC21Q5F1R6 531 aaKnown RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 C9orf129Q5T035 196 aaKnown RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF658Q5TYW1 1059 aaPredicted RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 SLC22A10Q63ZE4 541 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 CCDC73Q6ZRK6 1079 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 FBXO16Q8IX29 292 aaPredicted RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF713Q8N859 430 aaPredicted RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 OR13F1Q8NGS4 319 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 OR52J3Q8NH60 311 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 RFESDQ8TAC1 157 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 TMEM37Q8WXS4 190 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 KIR2DL4Q99706 377 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 APOOQ9BUR5 198 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ELOVL4Q9GZR5 314 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 IKZF5Q9H5V7 419 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 IL17CQ9P0M4 197 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 EPS15L1Q9UBC2 864 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 KLHL21Q9UJP4 597 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 CCPG1Q9ULG6 757 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 ZNF175Q9Y473 711 aa2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 TNRC18O15417 2968 aaPredicted RBP2.18□□□□□ -2.06
HDGFL3-202ENST00000562702 USP42Q9H9J4 1324 aaKnown RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 PCNTO95613 3336 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 EPOPA6NHQ4 379 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 SLC17A2O00624 439 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 CDX4O14627 284 aaPredicted RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 HTATSF1O43719 755 aaKnown RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 NME2P1O60361 137 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 HSF2BPO75031 334 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 B3GALNT1O75752 331 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 GOSR1O95249 250 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 SYNGR4O95473 234 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 SLC2A10O95528 541 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 ALPIP09923 528 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 RFC4P35249 363 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 OR1D4P47884 311 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 ALDH3B2P48448 385 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 NPY2RP49146 381 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 SSTP61278 116 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 C17orf67Q0P5P2 114 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 NME3Q13232 169 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 PPP2R5CQ13362 524 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 EIF2B1Q14232 305 aaKnown RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 C2orf83Q53S99 150 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 PAGE2BQ5JRK9 111 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 PRAMEF7Q5VXH5 474 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 DPY19L2P2Q6ZN68 376 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 PRSS48Q7RTY5 328 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 BNIPLQ7Z465 357 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 CADM2Q8N3J6 435 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 LEMD2Q8NC56 503 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 OR8H1Q8NGG4 311 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 LINC01006Q8NI28 216 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 CCDC26Q8TAB7 109 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 FNDC8Q8TC99 324 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 MGARPQ8TDB4 240 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 ANP32BQ92688 251 aaKnown RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 P3H4Q92791 437 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 TRIM44Q96DX7 344 aaPredicted RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 FAM122AQ96E09 287 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 VSIG2Q96IQ7 327 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 NAP1L3Q99457 506 aaPredicted RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 OPN3Q9H1Y3 402 aaPredicted RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 TNMDQ9H2S6 317 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 HPS4Q9NQG7 708 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 PRMT8Q9NR22 394 aaPredicted RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 KLRF1Q9NZS2 232 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 MTRRQ9UBK8 725 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 COPS7AQ9UBW8 275 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 APOBEC3BQ9UH17 382 aaKnown RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 MOSPD1Q9UJG1 213 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 PURGQ9UJV8 347 aaKnown RBP2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 KNSTRNQ9Y448 316 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 RTL1A6NKG5 1358 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 FLT4P35916 1363 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 TONSLQ96HA7 1378 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 SCN7AQ01118 1682 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 SCN9AQ15858 1988 aa2.17□□□□□ -2.06
HDGFL3-202ENST00000562702 COL4A1P02462 1669 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms