RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 UTP11Q9Y3A2 253 aaKnown RBP7.6□□□□□ -1.19
PALB2-202ENST00000561514 ARID1AO14497 2285 aa7.6□□□□□ -1.19
PALB2-202ENST00000561514 ARHGAP21Q5T5U3 1957 aa7.6□□□□□ -1.19
PALB2-202ENST00000561514 KIAA1549Q9HCM3 1950 aa7.6□□□□□ -1.19
PALB2-202ENST00000561514 MPDZO75970 2070 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 EML6Q6ZMW3 1958 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 ARHGEF9O43307 516 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 PLOD3O60568 738 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 BCAS2O75934 225 aaPredicted RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 DCTN3O75935 186 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 PSMG1O95456 288 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 TGM6O95932 706 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 OTCP00480 354 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 CGAP01215 116 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 SBK3P0C264 359 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 UBL4AP11441 157 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 COL6A2P12110 1019 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 HSD3B1P14060 373 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 PAX1P15863 534 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 PCSK2P16519 638 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 CRYGSP22914 178 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 HSD3B2P26439 372 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 TYK2P29597 1187 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 FEN1P39748 380 aaKnown RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 DIO3P55073 304 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 CLDN15P56746 228 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 C2orf54Q08AI8 447 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 TRAP1Q12931 704 aaKnown RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 EFR3AQ14156 821 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 LTB4RQ15722 352 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 OR2A2Q6IF42 318 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 GALNT18Q6P9A2 607 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 CLEC9AQ6UXN8 241 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 NPSR1Q6W5P4 371 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 LRRC74BQ6ZQY2 392 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 LUZP2Q86TE4 346 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 CCDC25Q86WR0 208 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 SAMD14Q8IZD0 417 aaPredicted RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 GCNT2Q8N0V5 402 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 MINDY2Q8NBR6 621 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 OR14L1PQ8NHC6 308 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 UHMK1Q8TAS1 419 aaKnown RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 RASSF5Q8WWW0 418 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 TMBIM1Q969X1 311 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 INTS12Q96CB8 462 aaKnown RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 TMCO6Q96DC7 493 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 CEP19Q96LK0 163 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 DOCK7Q96N67 2140 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 MRPL57Q9BQC6 102 aaKnown RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 AIFM2Q9BRQ8 373 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 UQCC2Q9BRT2 126 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 FAIM2Q9BWQ8 316 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 BRINP2Q9C0B6 783 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 ELOVL6Q9H5J4 265 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 FARSBQ9NSD9 589 aaKnown RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 EHD3Q9NZN3 535 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 STX18Q9P2W9 335 aaKnown RBP7.59□□□□□ -1.19
PALB2-202ENST00000561514 NDRG3Q9UGV2 375 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 PSME2Q9UL46 239 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 ZNF175Q9Y473 711 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 NINQ8N4C6 2090 aa7.59□□□□□ -1.19
PALB2-202ENST00000561514 SONP18583 2426 aaKnown RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 IGLV3-32A0A0A0MS00 114 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 A8MT66 165 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 LINC01387J3KSC0 135 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 PPP6CO00743 305 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 TMCC2O75069 709 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 ERAL1O75616 437 aaKnown RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 STAMBPO95630 424 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 OXSR1O95747 527 aaPredicted RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 PDYNP01213 254 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 IFI6P09912 130 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 CD8BP10966 210 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 GRK2P25098 689 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 CD79BP40259 229 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 KIR2DL2P43627 348 aaPredicted RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 RPL5P46777 297 aaKnown RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 CPA2P48052 419 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 STARP49675 285 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 BLVRAP53004 296 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 PNLIPRP2P54317 469 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 DSCR4P56555 118 aaPredicted RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 RAE1P78406 368 aaKnown RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 CSTF3Q12996 717 aaKnown RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 FGFBP1Q14512 234 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 TOMM20Q15388 145 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 TMEM44Q2T9K0 475 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 Q5PR19 223 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 UBAP2Q5T6F2 1119 aaKnown RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 SIGIRRQ6IA17 410 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 ZNF474Q6S9Z5 364 aaPredicted RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 C20orf204Q6ZNR8 217 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 MILR1Q7Z6M3 343 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 C1orf52Q8N6N3 182 aaKnown RBP7.58□□□□□ -1.2
PALB2-202ENST00000561514 ADCY4Q8NFM4 1077 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 STMN2Q93045 179 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 PIGTQ969N2 578 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 ATP6V1E2Q96A05 226 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 PHF21BQ96EK2 531 aa7.58□□□□□ -1.2
PALB2-202ENST00000561514 SFXN2Q96NB2 322 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms