RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 NKX3-1Q99801 234 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 ACBD6Q9BR61 282 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 FEM1AQ9BSK4 669 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SF3B5Q9BWJ5 86 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 HINT2Q9BX68 163 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 C1QTNF3Q9BXJ4 246 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 DUSP16Q9BY84 665 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RAB34Q9BZG1 259 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 COMMD4Q9H0A8 199 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR52A5Q9H2C5 316 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ARRDC1-AS1Q9H2J1 176 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PIGUQ9H490 435 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RHOJQ9H4E5 214 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ALG9Q9H6U8 611 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 NMRAL1Q9HBL8 299 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SLC38A10Q9HBR0 1119 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 LYRM4Q9HD34 91 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RBAKQ9NYW8 714 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 ADA2Q9NZK5 511 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 FLRT3Q9NZU0 649 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MYEF2Q9P2K5 600 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 MBD2Q9UBB5 411 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ABCD2Q9UBJ2 740 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 UXTQ9UBK9 157 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 TUBGCP4Q9UGJ1 667 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SIX4Q9UIU6 781 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PILRBQ9UKJ0 227 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ELF5Q9UKW6 265 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.83□□□□□ -2.12
RTF1-207ENST00000561076 GAB2Q9UQC2 676 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MEMO1Q9Y316 297 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR2W1Q9Y3N9 320 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CSDC2Q9Y534 153 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 KPTNQ9Y664 436 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SAR1BQ9Y6B6 198 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 GRIN2DO15399 1336 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 USP47Q96K76 1375 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZMYM2Q9UBW7 1377 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TRBV4-1A0A0J9YWV2 114 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TEX13DA0A0J9YY54 714 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 KBTBD11-OT1A0A1B0GTJ5 212 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 LOC101059948A0A1B0GTJ6 334 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 hCG_38984A0A1B0GV85 526 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 A0A1W2PPC1 479 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 LINC01553A4QN01 128 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 LILRA5A6NI73 299 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PP2D1A8MPX8 630 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 IQCF5A8MTL0 148 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PROB1E7EW31 1015 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 C11orf98E9PRG8 122 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 G3V4G9 280 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 H7C0C1 242 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 K7ESM1 405 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SIRPB1O00241 398 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 RAB29O14966 203 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 GPAA1O43292 621 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PPIHO43447 177 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 SOX15O60248 233 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DUSP11O75319 330 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 UGT2B17O75795 530 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CABYRO75952 493 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR2F2O95006 317 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 FARS2O95363 451 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 ETHE1O95571 254 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 FGF19O95750 216 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 IGSF6O95976 241 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 MMP1P03956 469 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 NR3C1P04150 777 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 P04436 131 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 RPLP0P05388 317 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 PRSS2P07478 247 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 C1QTNF9P0C862 333 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PET100P0DJ07 73 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ADORA3P0DMS8 318 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 IGHV4-30-4P0DP06 118 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CCL2P13500 99 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 NQO2P16083 231 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TAL1P17542 331 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 RPL35AP18077 110 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 PGCP20142 388 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC2A5P22732 501 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 NR4A1P22736 598 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 GNLYP22749 145 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 FASP25445 335 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 MSNP26038 577 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 CERS1P27544 350 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SSTR2P30874 369 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 HOXD3P31249 432 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 CCKBRP32239 447 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DUTP33316 252 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 PLA2G5P39877 138 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ID1P41134 155 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 NAA10P41227 235 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC1A1P43005 524 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 BRCC3P46736 316 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 AMTP48728 403 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DUSP3P51452 185 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 ARHGDIAP52565 204 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PEX3P56589 373 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TUBA1BP68363 451 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms