RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TACO1Q9BSH4 297 aaKnown RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 RBM4Q9BWF3 364 aaKnown RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 DEFB126Q9BYW3 111 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 COQ10BQ9H8M1 238 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 USE1Q9NZ43 259 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 KCNE5Q9UJ90 142 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 SAMHD1Q9Y3Z3 626 aaKnown RBP7.94□□□□□ -1.14
TRAF3-209ENST00000560463 NPFFR2Q9Y5X5 522 aa7.94□□□□□ -1.14
TRAF3-209ENST00000560463 SPTBN4Q9H254 2564 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 LOC101059948A0A1B0GTJ6 334 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ARRDC5A6NEK1 342 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 SAC3D1A6NKF1 404 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 H3BNH8 94 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 TNFRSF11BO00300 401 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 PEX12O00623 359 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 SCDO00767 359 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 SOCS2O14508 198 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 AP3D1O14617 1153 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 PPM1BO75688 479 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 DIRAS1O95057 198 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 HPP00738 406 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 LIPCP11150 499 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 HPGDP15428 266 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ACADSP16219 412 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 TNFRSF1BP20333 461 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ABCD3P28288 659 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 CLK3P49761 638 aaKnown RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 CDH12P55289 794 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 SPIBQ01892 262 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 EPS8Q12929 822 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 CHAF1BQ13112 559 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 RTP5Q14D33 572 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 NNATQ16517 81 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 KLHL26Q53HC5 615 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 CMPK2Q5EBM0 449 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 COLEC12Q5KU26 742 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 PDZK1Q5T2W1 519 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 MRPL2Q5T653 305 aaKnown RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 DEF8Q6ZN54 512 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF550Q7Z398 422 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 NUP54Q7Z3B4 507 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 PPP1R32Q7Z5V6 425 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ZAR1Q86SH2 424 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 STK32CQ86UX6 486 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 EPHX4Q8IUS5 362 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 DND1Q8IYX4 353 aaKnown RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 OFCC1Q8IZS5 231 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ARMC10Q8N2F6 343 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 CLIP4Q8N3C7 705 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 CBR4Q8N4T8 237 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 TOR1AIP2Q8NFQ8 470 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 OR6T1Q8NGN1 323 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 PHF10Q8WUB8 498 aaKnown RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 DNAJC9Q8WXX5 260 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 NKD1Q969G9 470 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 KIAA1143Q96AT1 154 aaPredicted RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 EFHD2Q96C19 240 aaPredicted RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 OMA1Q96E52 524 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 DHRS1Q96LJ7 313 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF597Q96LX8 424 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ADOQ96SZ5 270 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 SLC29A1Q99808 456 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 PSD2Q9BQI7 771 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 GABARAPL1Q9H0R8 117 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ANKRD19PQ9H560 264 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 HHATLQ9HCP6 504 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ASCL3Q9NQ33 180 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 ACER3Q9NUN7 267 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 MYOTQ9UBF9 498 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 TESQ9UGI8 421 aaKnown RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 TMCC3Q9ULS5 477 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 RAB26Q9ULW5 256 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 A4GNTQ9UNA3 340 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 C15orf41Q9Y2V0 281 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 CHST2Q9Y4C5 530 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 LYVE1Q9Y5Y7 322 aa7.93□□□□□ -1.14
TRAF3-209ENST00000560463 TNRC6AQ8NDV7 1962 aaKnown RBP7.93□□□□□ -1.14
TRAF3-209ENST00000560463 NPIPA5A0A0B4J1W7 369 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 A0A1W2PRQ8 180 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 SERINC4A6NH21 518 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 TMEM200CA6NKL6 621 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 NPIPA7E9PJI5 369 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 M0R3H8 397 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 PDLIM1O00151 329 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 PRKNO60260 465 aaPredicted RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 OR5F1O95221 314 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 UTS2O95399 124 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 OXSR1O95747 527 aaPredicted RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 ALPLP05186 524 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 H1F0P07305 194 aaKnown RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 NPIPA8P0DM63 369 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 THRBP10828 461 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 CYP4B1P13584 511 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 ANXA8P13928 327 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 OTX2P32243 289 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 LIMS1P48059 325 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 TAS2R41P59536 307 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 RPS18P62269 152 aaKnown RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 ST3GAL3Q11203 375 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms