RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	PROK2	Q9HC23	129 aa		11.23	□□□□□ -0.61
USP8-209	ENST00000560297	TAS2R1	Q9NYW7	299 aa		11.23	□□□□□ -0.61
USP8-209	ENST00000560297	ANAPC2	Q9UJX6	822 aa		11.23	□□□□□ -0.61
USP8-209	ENST00000560297	BOK	Q9UMX3	212 aa	Predicted RBP	11.23	□□□□□ -0.61
USP8-209	ENST00000560297	IFT52	Q9Y366	437 aa		11.23	□□□□□ -0.61
USP8-209	ENST00000560297	DTNA	Q9Y4J8	743 aa		11.23	□□□□□ -0.61
USP8-209	ENST00000560297	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.23	□□□□□ -0.61
USP8-209	ENST00000560297	NME4	O00746	187 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	TRIM3	O75382	744 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	SERPINB7	O75635	380 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	UGT2B17	O75795	530 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	PDE9A	O76083	593 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	ZIC2	O95409	532 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	DBI	P07108	87 aa	Known RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	IL7R	P16871	459 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	ELAVL4	P26378	380 aa	Known RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	PCGF2	P35227	344 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	ADH7	P40394	386 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	PTGDS	P41222	190 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	MASP1	P48740	699 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	GABPB1	Q06547	395 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	LARS2	Q15031	903 aa	Known RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	LCE2D	Q5TA82	110 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	RINL	Q6ZS11	566 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	CCDC121	Q6ZUS5	278 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	PATL1	Q86TB9	770 aa	Known RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	MARCH3	Q86UD3	253 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	IFNE	Q86WN2	208 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	CMIP	Q8IY22	773 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	ZFP62	Q8NB50	900 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	ZG16B	Q96DA0	208 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	TMEM41A	Q96HV5	264 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	RUBCNL	Q9H714	662 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	ZFP64	Q9NPA5	681 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.22	□□□□□ -0.61
USP8-209	ENST00000560297	DEPP	Q9NTK1	212 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	FLRT3	Q9NZU0	649 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	DSPP	Q9NZW4	1301 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	WIF1	Q9Y5W5	379 aa		11.22	□□□□□ -0.61
USP8-209	ENST00000560297	PRORSD1P	A6NEY8	169 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	SERINC4	A6NH21	518 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	GTPBP1	O00178	669 aa	Known RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	GYG2	O15488	501 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	GMNN	O75496	209 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	CBR3	O75828	277 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	ANGPTL1	O95841	491 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	IFNA14	P01570	189 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	CRYAB	P02511	175 aa	Known RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	THBS1	P07996	1170 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	RPS4Y1	P22090	263 aa	Known RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	MSX1	P28360	303 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	HTR1E	P28566	365 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	DNASE1L1	P49184	302 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	GSK3B	P49841	420 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	MEOX1	P50221	254 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	GAS1	P54826	345 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	PCBP3	P57721	371 aa	Known RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	GPR85	P60893	370 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	KCNJ10	P78508	379 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	FOXO1	Q12778	655 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	HYAL4	Q2M3T9	481 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	DNAL1	Q4LDG9	190 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	PDZK1	Q5T2W1	519 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	BICRAL	Q6AI39	1079 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	TIGD3	Q6B0B8	471 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	APOOL	Q6UXV4	268 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	CCDC80	Q76M96	950 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	EIF3M	Q7L2H7	374 aa	Known RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	SLC22A16	Q86VW1	577 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	PTRH1	Q86Y79	214 aa	Known RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	PLCZ1	Q86YW0	608 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	MICU2	Q8IYU8	434 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF614	Q8N883	585 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	OR1J4	Q8NGS1	313 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	OR52P1P	Q8NH57	321 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	DUSP19	Q8WTR2	217 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF597	Q96LX8	424 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	BTBD10	Q9BSF8	475 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	GALNT9	Q9HCQ5	603 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	PPP4R1L	Q9P1A2	415 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	CD300A	Q9UGN4	299 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	KCNE5	Q9UJ90	142 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	PRDM4	Q9UKN5	801 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	PRPF19	Q9UMS4	504 aa	Known RBP	11.21	□□□□□ -0.61
USP8-209	ENST00000560297	SLC35A3	Q9Y2D2	325 aa		11.21	□□□□□ -0.61
USP8-209	ENST00000560297	CPAMD8	Q8IZJ3	1885 aa		11.21	□□□□□ -0.62
USP8-209	ENST00000560297	NPIPA5	A0A0B4J1W7	369 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297	C2orf72	A6NCS6	295 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297	NPIPA7	E9PJI5	369 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297		G3V3Y1	287 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297		M0QX08	132 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297	ACOT7	O00154	380 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297	SNPH	O15079	494 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297	GSTA4	O15217	222 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297	SCO2	O43819	266 aa		11.2	□□□□□ -0.62
USP8-209	ENST00000560297	EIF4E2	O60573	245 aa	Known RBP	11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms