RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZNF486Q96H40 463 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 OR2A5Q96R48 311 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 SDF2Q99470 211 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 CTRCQ99895 268 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 PRSS27Q9BQR3 290 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 C20orf141Q9NUB4 165 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 KCNE5Q9UJ90 142 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 CDH10Q9Y6N8 788 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 IRGMA1A4Y4 181 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 KLF8O95600 359 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 EGFP01133 1207 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 CPMP14384 443 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 ATP6V1E1P36543 226 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 ARFIP1P53367 373 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 FXYD6P3P58550 94 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 ARHGAP11BQ3KRB8 267 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 PDZK1Q5T2W1 519 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 DDI2Q5TDH0 399 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 FCRLBQ6BAA4 426 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 VASNQ6EMK4 673 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 ANKRD54Q6NXT1 300 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 PLBD1Q6P4A8 553 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 GLCCI1Q86VQ1 547 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 RAB43Q86YS6 212 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 PEX5LQ8IYB4 626 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 GJD3Q8N144 294 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 OR2L13Q8N349 312 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 ATP6V1C2Q8NEY4 427 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 OR6F1Q8NGZ6 308 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 HCAR1Q9BXC0 346 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 TP63Q9H3D4 680 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 ANKRD19PQ9H560 264 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 MTHFD2LQ9H903 347 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 EVA1BQ9NVM1 165 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 DAPP1Q9UN19 280 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 NDRG2Q9UN36 371 aaKnown RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 OR6C74A6NCV1 312 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 DUXAA6NLW8 204 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 GABRPO00591 440 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 POLR1CO15160 346 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 B3GALT2O43825 422 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 FGF17O60258 216 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 SMIM10L1P0DMW3 83 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 NDUFV2P19404 249 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 HTR1FP30939 366 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 LSSP48449 732 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 FZD5Q13467 585 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 SUZ12Q15022 739 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 EXOSC7Q15024 291 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF628Q5EBL2 1059 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF544Q6NX49 715 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 XKRXQ6PP77 449 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 CXXC5Q7LFL8 322 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 KLHL36Q8N4N3 616 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ARIH2OSQ8N7S6 290 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM99Q8N816 258 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 FRMD1Q8N878 549 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 OR2T33Q8NG76 320 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 NR4A3Q92570 626 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 FAM131CQ96AQ9 280 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 EFHD2Q96C19 240 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 TM4SF19Q96DZ7 209 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 SMIM10Q96HG1 83 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 BMFQ96LC9 184 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 SERINC2Q96SA4 455 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 PRRG3Q9BZD7 231 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 MTIF3Q9H2K0 278 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 UBQLN3Q9H347 655 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 TRIM45Q9H8W5 580 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ISYNA1Q9NPH2 558 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 STARD5Q9NSY2 213 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF221Q9UK13 617 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 EXOGQ9Y2C4 368 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 GSTK1Q9Y2Q3 226 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 N6AMT1Q9Y5N5 214 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 TRDV1A0A1B0GX56 115 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 MEIOCA2RUB1 952 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 UNC119BA6NIH7 251 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 NT5EP21589 574 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ACSL1P33121 698 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 RFX3P48380 749 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 CSTF1Q05048 431 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 SCN1BQ07699 218 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 DSG2Q14126 1118 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 GPR18Q14330 331 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 NFATC4Q14934 902 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 P2RY14Q15391 338 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 DCST2Q5T1A1 773 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 MRPL2Q5T653 305 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 CNIH2Q6PI25 160 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ZC3H14Q6PJT7 736 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 CD200R1LQ6Q8B3 271 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 FIGLAQ6QHK4 219 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 FANK1Q8TC84 345 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 SMAP2Q8WU79 429 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 RFKQ969G6 155 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ELSPBP1Q96BH3 223 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms