RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 C9orf16Q9BUW7 83 aa13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 RBM38Q9H0Z9 239 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 POLE3Q9NRF9 147 aa13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 OR10H1Q9Y4A9 318 aa13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 MED13Q9UHV7 2174 aa13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 SPTBN2O15020 2390 aa13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 MPDZO75970 2070 aa13.18□□□□□ -0.3
RABGGTA-209ENST00000559551 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 SYNDIG1LA6NDD5 238 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CCDC160A6NGH7 325 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 G3V2T6 193 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 SOCS6O14544 535 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 SOX30O94993 753 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 COX6A1P12074 109 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 PRG2P13727 222 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 NID1P14543 1247 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 IL7RP16871 459 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 TCN2P20062 427 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 NR0B1P51843 470 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 PPP2R2BQ00005 443 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 PIN1Q13526 163 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 MRPL2Q5T653 305 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 SHQ1Q6PI26 577 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 KIRREL2Q6UWL6 708 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 DEF8Q6ZN54 512 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 STK32CQ86UX6 486 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CACTIN-AS1Q8N1I8 211 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 LPAR4Q99677 370 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 PIP5K1AQ99755 562 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 DLL3Q9NYJ7 618 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 COPS7AQ9UBW8 275 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 SAMHD1Q9Y3Z3 626 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 AKAP13Q12802 2813 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 IGHV1-45A0A0A0MS14 117 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CDHR4A6H8M9 788 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 OR6C76A6NM76 312 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 TO15178 435 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 ALPLP05186 524 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 DBIP07108 87 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CEACAM1P13688 526 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 RHCEP18577 417 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 NOVA1P51513 510 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 NR1H2P55055 460 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CDH12P55289 794 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 DCTN2Q13561 401 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 ZNF141Q15928 474 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 APOOLQ6UXV4 268 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 PPP1R32Q7Z5V6 425 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 OR52J3Q8NH60 311 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 DHRS1Q96LJ7 313 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 IMMP1LQ96LU5 166 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 FUZQ9BT04 418 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 OSBPL10Q9BXB5 764 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 RTN4RQ9BZR6 473 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CTPS2Q9NRF8 586 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 TMEFF2Q9UIK5 374 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 TCFL5Q9UL49 500 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 CFL2Q9Y281 166 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 IFT52Q9Y366 437 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 AP4B1Q9Y6B7 739 aa13.17□□□□□ -0.3
RABGGTA-209ENST00000559551 PCDH17O14917 1159 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 TSPAN2O60636 221 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 NTN1O95631 604 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 IL33O95760 270 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 THY1P04216 161 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 FPR1P21462 350 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 DNAJA1P31689 397 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 HMGA2P52926 109 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 SPIBQ01892 262 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 APOFQ13790 326 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 DAG1Q14118 895 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 EXOC3L2Q2M3D2 409 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 NHSL2Q5HYW2 709 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 CYP4Z1Q86W10 505 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 TMPRSS12Q86WS5 348 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 SVOPLQ8N434 492 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 PACRGLQ8N7B6 248 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 OR11G2Q8NGC1 345 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 CNOT9Q92600 299 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 VMP1Q96GC9 406 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 ZNF347Q96SE7 839 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 EPYCQ99645 322 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 ZNF700Q9H0M5 742 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 GABARAPL1Q9H0R8 117 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 REEP1Q9H902 201 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 SPTBN4Q9H254 2564 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 TRBV4-1A0A0J9YWV2 114 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 TRBV11-1A0A0K0K1C0 115 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 LOC101059948A0A1B0GTJ6 334 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 A0A1W2PQ72 361 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 ADAM10O14672 748 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 E2F6O75461 281 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 NADKO95544 446 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms