RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZNF619Q8N2I2 560 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 FADS6Q8N9I5 356 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 OR2M3Q8NG83 312 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 CPT1CQ8TCG5 803 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 FAR1Q8WVX9 515 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 NR4A3Q92570 626 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 MIB2Q96AX9 1013 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 TMEM41AQ96HV5 264 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 JSRP1Q96MG2 331 aaPredicted RBP9.93□□□□□ -0.82
TPM1-217ENST00000559108 TRNT1Q96Q11 434 aaKnown RBP9.93□□□□□ -0.82
TPM1-217ENST00000559108 TREX2Q9BQ50 279 aaPredicted RBP9.93□□□□□ -0.82
TPM1-217ENST00000559108 TNFRSF10DQ9UBN6 386 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 ABCG2Q9UNQ0 655 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 C15orf41Q9Y2V0 281 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 L3MBTL1Q9Y468 752 aa9.93□□□□□ -0.82
TPM1-217ENST00000559108 IGLV3-32A0A0A0MS00 114 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 DUXAA6NLW8 204 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 TMEM229AB2RXF0 380 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 NPIPA5E9PKD4 350 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 KLRC4-KLRK1H3BQV0 150 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 SLC28A2O43868 658 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 STX11O75558 287 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 UBOX5O94941 541 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 GUSBP08236 651 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 ZNF24P17028 368 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 TCEA1P23193 301 aaKnown RBP9.92□□□□□ -0.82
TPM1-217ENST00000559108 CPOXP36551 454 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 UQCRFS1P47985 274 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 SLC7A2P52569 658 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 ATP12AP54707 1039 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 PSPHP78330 225 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 KRT72Q14CN4 511 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 MMEL1Q495T6 779 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 GLIPR1L2Q4G1C9 344 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 EIPR1Q53HC9 387 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 SLC30A6Q6NXT4 461 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 ZNF836Q6ZNA1 936 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 LRRC74BQ6ZQY2 392 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 PRICKLE2Q7Z3G6 844 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 VRK2Q86Y07 508 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 FAM71CQ8NEG0 241 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 OR8J3Q8NGG0 315 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 OR10A6Q8NH74 314 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 DUSP19Q8WTR2 217 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 TMCO6Q96DC7 493 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 ZNF597Q96LX8 424 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 ZNF583Q96ND8 569 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 WFDC6Q9BQY6 131 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 G6PC3Q9BUM1 346 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 DEFB127Q9H1M4 99 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 SLC6A15Q9H2J7 730 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 DSN1Q9H410 356 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 ZDHHC11Q9H8X9 412 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 ZFP64Q9NPA5 681 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 UBQLN4Q9NRR5 601 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 EXD2Q9NVH0 621 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 MED11Q9P086 117 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 SPRR3Q9UBC9 169 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 TAGLN3Q9UI15 199 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 NPIPA1Q9UND3 350 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 WDR45Q9Y484 360 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 GTF3C1Q12789 2109 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 RELNP78509 3460 aa9.92□□□□□ -0.82
TPM1-217ENST00000559108 SERINC4A6NH21 518 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 AGAP5A6NIR3 686 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 SHISA8B8ZZ34 492 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 TPST1O60507 370 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 PDE9AO76083 593 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 SNX4O95219 450 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 PGM3O95394 542 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 NR2F1P10589 423 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 AQP1P29972 269 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 PGM1P36871 562 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 MAGEA8P43361 318 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 PCBP3P57721 371 aaKnown RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 B3GALT5-AS1P59052 145 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 PSME3P61289 254 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 PPIAP62937 165 aaKnown RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 SLC25A3Q00325 362 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 CDK6Q00534 326 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 ALDH6A1Q02252 535 aaKnown RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 SKP2Q13309 424 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 MRPL49Q13405 166 aaKnown RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 SNTA1Q13424 505 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 FGFBP1Q14512 234 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 TOMM34Q15785 309 aaPredicted RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 TBCELQ5QJ74 424 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 DCST1Q5T197 706 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 ATAD3BQ5T9A4 648 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 FAM180AQ6UWF9 173 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 ARSKQ6UWY0 536 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 HACD2Q6Y1H2 254 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 RINLQ6ZS11 566 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 TRILQ7L0X0 811 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 PLCZ1Q86YW0 608 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 DNAJB8Q8NHS0 232 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 CNOT9Q92600 299 aaKnown RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 SH3YL1Q96HL8 342 aaPredicted RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 THUMPD3Q9BV44 507 aaKnown RBP9.91□□□□□ -0.82
TPM1-217ENST00000559108 TMEM38AQ9H6F2 299 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms