RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 UFM1P61960 85 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 HBA1P69905 142 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 TNP2Q05952 138 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 LSM12Q3MHD2 195 aaKnown RBP10.89□□□□□ -0.67
TPM1-216ENST00000558910 ATG16L1Q676U5 607 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 CDC73Q6P1J9 531 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 SEM1Q6ZVN7 128 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 HMGN2P46Q86SG4 172 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 WDR75Q8IWA0 830 aaKnown RBP10.89□□□□□ -0.67
TPM1-216ENST00000558910 NAXEQ8NCW5 288 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 OR2M3Q8NG83 312 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 OR4C3Q8NH37 302 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 LILRB4Q8NHJ6 448 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 TLCD1Q96CP7 247 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 ARSGQ96EG1 525 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 TUBA1CQ9BQE3 449 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 MANSC1Q9H8J5 431 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 SDHAF3Q9NRP4 125 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.89□□□□□ -0.67
TPM1-216ENST00000558910 LRBAP50851 2863 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 RNF103-CHMP3A0A140T963 221 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 EEF1E1-BLOC1S5C9J1V9 151 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 SDHDO14521 159 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 EEF1E1O43324 174 aaKnown RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 NDUFB5O43674 189 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 CYP7B1O75881 506 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 TOXO94900 526 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 OXSR1O95747 527 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 ALDOCP09972 364 aaKnown RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 CD33P20138 364 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 POU3F2P20265 443 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 AGAP20933 346 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 ATP6V1C1P21283 382 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 SRD5A2P31213 254 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 FRKP42685 505 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 DSCR4P56555 118 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 RCAN2Q14206 197 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 NDUFAF6Q330K2 333 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 SLC9B1Q4ZJI4 515 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 SPANXN4Q5MJ08 99 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 ARSKQ6UWY0 536 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 DCHS2Q6V1P9 2916 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 P4HA3Q7Z4N8 544 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 LSRQ86X29 649 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 RIMKLAQ8IXN7 391 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 PM20D2Q8IYS1 436 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 GCNT2Q8N0V5 402 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 GOLGA6L1Q8N7Z2 621 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 C9orf106Q8NAJ2 232 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 OR56A1Q8NGH5 318 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 DYDC1Q8WWB3 177 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 COQ8BQ96D53 544 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 SLC35G5Q96KT7 338 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 TEX37Q96LM6 180 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 KLHDC3Q9BQ90 382 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 BHLHE41Q9C0J9 482 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 OR2B2Q9GZK3 357 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 TMEM185BQ9H7F4 350 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 THAP1Q9NVV9 213 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 FAM120CQ9NX05 1096 aaKnown RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 GDF2Q9UK05 429 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 PCDHGB4Q9UN71 923 aa10.88□□□□□ -0.67
TPM1-216ENST00000558910 NUP214P35658 2090 aaPredicted RBP10.88□□□□□ -0.67
TPM1-216ENST00000558910 KIAA1549Q9HCM3 1950 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 CLCA1A8K7I4 914 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 AHRRA9YTQ3 701 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 SCDO00767 359 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 ZIC3O60481 467 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 DIAPH2O60879 1101 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 NUDT14O95848 222 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 C1QCP02747 245 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 GSNP06396 782 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 MATN1P21941 496 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 MYBPHQ13203 477 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 FAM174BQ3ZCQ3 159 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 FLYWCH1Q4VC44 716 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 TTMPQ5BVD1 217 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 DCST2Q5T1A1 773 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 TNFAIP8L2Q6P589 184 aaPredicted RBP10.87□□□□□ -0.67
TPM1-216ENST00000558910 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 AAGABQ6PD74 315 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 ENPP6Q6UWR7 440 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 DNAJC14Q6Y2X3 702 aaPredicted RBP10.87□□□□□ -0.67
TPM1-216ENST00000558910 CHMP1BQ7LBR1 199 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 C6orf120Q7Z4R8 191 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 TMCO5AQ8N6Q1 288 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 ATP6V1C2Q8NEY4 427 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 PHOSPHO1Q8TCT1 267 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 ZNF75CPQ92670 426 aaPredicted RBP10.87□□□□□ -0.67
TPM1-216ENST00000558910 INTS12Q96CB8 462 aaKnown RBP10.87□□□□□ -0.67
TPM1-216ENST00000558910 THOC1Q96FV9 657 aaKnown RBP10.87□□□□□ -0.67
TPM1-216ENST00000558910 ZNF764Q96H86 408 aaPredicted RBP10.87□□□□□ -0.67
TPM1-216ENST00000558910 OR7D2Q96RA2 312 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 NPAS1Q99742 590 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 BTBD2Q9BX70 525 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 ACTRT3Q9BYD9 372 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 PRDM14Q9GZV8 571 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 PTGES2Q9H7Z7 377 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 MEAF6Q9HAF1 191 aa10.87□□□□□ -0.67
TPM1-216ENST00000558910 ITGB1BP2Q9UKP3 347 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms