RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 UTS2RQ9UKP6 389 aa9.54□□□□□ -0.88
TPM1-212ENST00000558347 HIVEP3Q5T1R4 2406 aa9.54□□□□□ -0.88
TPM1-212ENST00000558347 TRAV17A0A0B4J275 112 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 GABRR3A8MPY1 467 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 MAN1A2O60476 641 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 LRATO95237 230 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ZNF682O95780 498 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 GBAP04062 536 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 IL3P08700 152 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 COX7A2P14406 83 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 DRD2P14416 443 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ZNF182P17025 639 aaPredicted RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 DDX5P17844 614 aaKnown RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 DDCP20711 480 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 MAOAP21397 527 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ACVR2AP27037 513 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 BMXP51813 675 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 GP2P55259 537 aaKnown RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 SLC26A5P58743 744 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 TAS2R50P59544 299 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 BTN3A2P78410 334 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 IL5RAQ01344 420 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 C2orf80Q0P641 193 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 RUNX2Q13950 521 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ZNF846Q147U1 533 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 HEPACAMQ14CZ8 416 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 EXT1Q16394 746 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 CPTPQ5TA50 214 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ABHD17BQ5VST6 288 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 H3F3CQ6NXT2 135 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 FAHD1Q6P587 224 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 QSOX2Q6ZRP7 698 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 SLC16A12Q6ZSM3 486 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ZNF551Q7Z340 670 aaPredicted RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 TSPYL5Q86VY4 417 aaPredicted RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 C10orf111Q8N326 155 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 NATD1Q8N6N6 113 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 VPS37AQ8NEZ2 397 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 OR7A2PQ8NGA2 310 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 GIPC3Q8TF64 312 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 SSC4DQ8WTU2 575 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 S100ZQ8WXG8 99 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 VMP1Q96GC9 406 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 PTCHD1Q96NR3 888 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 PANX1Q96RD7 426 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 TAAR6Q96RI8 345 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ZNF347Q96SE7 839 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 CSF3RQ99062 836 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 LPAR4Q99677 370 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 BHLHE41Q9C0J9 482 aaPredicted RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 WDR12Q9GZL7 423 aaKnown RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 RNF32Q9H0A6 362 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM1-212ENST00000558347 MMP25Q9NPA2 562 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ATAD3AQ9NVI7 634 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 VNN3Q9NY84 501 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 TAS2R7Q9NYW3 318 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 STMN3Q9NZ72 180 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 EHD3Q9NZN3 535 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 ERRFI1Q9UJM3 462 aaPredicted RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 NDRG4Q9ULP0 352 aaKnown RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 ASB4Q9Y574 426 aa9.53□□□□□ -0.88
TPM1-212ENST00000558347 NUP214P35658 2090 aaPredicted RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 SPTAN1Q13813 2472 aaKnown RBP9.53□□□□□ -0.88
TPM1-212ENST00000558347 hCG_2014768A0A024R1R8 64 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 IGKV3D-11A0A0A0MRZ8 115 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 TCRBV16S1A1N1A0A5B0 115 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 OR5H15A6NDH6 313 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 B3GALT2O43825 422 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 BCAS1O75363 584 aaPredicted RBP9.52□□□□□ -0.88
TPM1-212ENST00000558347 GSNP06396 782 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 RNH1P13489 461 aaKnown RBP9.52□□□□□ -0.88
TPM1-212ENST00000558347 PCGF2P35227 344 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 DAPP51397 102 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 SLC35A2P78381 396 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 TEKQ02763 1124 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 ACER2Q5QJU3 275 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 SYT6Q5T7P8 510 aaPredicted RBP9.52□□□□□ -0.88
TPM1-212ENST00000558347 ZNF324BQ6AW86 544 aaPredicted RBP9.52□□□□□ -0.88
TPM1-212ENST00000558347 C16orf87Q6PH81 154 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 FAM180AQ6UWF9 173 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 CYP4Z1Q86W10 505 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 ANKRD46Q86W74 232 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 PTOV1Q86YD1 416 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 BEST3Q8N1M1 668 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 MINDY2Q8NBR6 621 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 TMEM52Q8NDY8 209 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 CDC26Q8NHZ8 85 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 ELP5Q8TE02 316 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 RORBQ92753 470 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 ABTB1Q969K4 478 aaPredicted RBP9.52□□□□□ -0.88
TPM1-212ENST00000558347 YIPF6Q96EC8 236 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 FAM210AQ96ND0 272 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 SLX1AQ9BQ83 275 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 DUSP26Q9BV47 211 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 FAIM2Q9BWQ8 316 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 REEP1Q9H902 201 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 LYRM4Q9HD34 91 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 ANKRD10Q9NXR5 420 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms