RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 KIR3DL1P43629 444 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CHN2P52757 468 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 PRKAG1P54619 331 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CLDN8P56748 225 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 C21orf58P58505 322 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 C17orf67Q0P5P2 114 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 FOXO1Q12778 655 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 HSPB2Q16082 182 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 UGT3A2Q3SY77 523 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 GXYLT1Q4G148 440 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 DNAL1Q4LDG9 190 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CT45A2Q5DJT8 189 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 RNFT1Q5M7Z0 435 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 C1orf185Q5T7R7 199 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ATAD3BQ5T9A4 648 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 IZUMO2Q6UXV1 221 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 IFNEQ86WN2 208 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 WDR75Q8IWA0 830 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 GLB1L3Q8NCI6 653 aaPredicted RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 NUP43Q8NFH3 380 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ADAMTS15Q8TE58 950 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 SLC9A6Q92581 669 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 SDCCAG3Q96C92 435 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 STACQ99469 402 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 DUSP26Q9BV47 211 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 TUBB1Q9H4B7 451 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CACYBPQ9HB71 228 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 KCNJ16Q9NPI9 418 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ZCCHC3Q9NUD5 404 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 EXD2Q9NVH0 621 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ALKBH4Q9NXW9 302 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 MRPS18CQ9Y3D5 142 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 WIF1Q9Y5W5 379 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 LRRK2Q5S007 2527 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 TMEM233B4DJY2 109 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 KLF11O14901 512 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 UGT2B11O75310 529 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ZCCHC18P0CG32 403 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CYP4B1P13584 511 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 NAT1P18440 290 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CHMP24386 653 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 HTR1EP28566 365 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 SRD5A2P31213 254 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 DNAJA1P31689 397 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 EVI2BP34910 448 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 FRKP42685 505 aaPredicted RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 RFX3P48380 749 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 STX1BP61266 288 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 HSF1Q00613 529 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 SRSF1Q07955 248 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP3-208ENST00000558285 BST1Q10588 318 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 PGS1Q32NB8 556 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 FAM180BQ6P0A1 224 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 LACC1Q8IV20 430 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ERI1Q8IV48 349 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 ZNF781Q8N8C0 355 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 OR2T11Q8NH01 316 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 CLHC1Q8NHS4 586 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 MGARPQ8TDB4 240 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 OIT3Q8WWZ8 545 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 HGDQ93099 445 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ZFP3Q96NJ6 502 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 KCNK17Q96T54 332 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 USB1Q9BQ65 265 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 OCSTAMPQ9BR26 566 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 C1orf50Q9BV19 199 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 BTBD2Q9BX70 525 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 ACTRT3Q9BYD9 372 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 RBM38Q9H0Z9 239 aaKnown RBP7.92□□□□□ -1.14
USP3-208ENST00000558285 PALMDQ9NP74 551 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 EQTNQ9NQ60 294 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 DUSP22Q9NRW4 184 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 INIPQ9NRY2 104 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 MRGBPQ9NV56 204 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 NTMQ9P121 344 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 PTGDR2Q9Y5Y4 395 aa7.92□□□□□ -1.14
USP3-208ENST00000558285 A0A087WZY1 265 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 A0A1W2PS29 197 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 PINLYPA6NC86 204 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 RNASET2O00584 256 aaKnown RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 DVL2O14641 736 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 GNB5O14775 395 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 TSPAN2O60636 221 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 TGDSO95455 350 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 IL2RAP01589 272 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 NGFRP08138 427 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 CREB1P16220 341 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 TACR1P25103 407 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 S100A3P33764 101 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 SOAT1P35610 550 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 ZFP36L2P47974 494 aaKnown RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 CCT3P49368 545 aaKnown RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 DSCR4P56555 118 aaPredicted RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 NUP107P57740 925 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 RPS3AP61247 264 aaKnown RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 POU6F2P78424 691 aaPredicted RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 DUSP8Q13202 625 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 FGFBP1Q14512 234 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 ZNF630Q2M218 657 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms