RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 FNDC7Q5VTL7 733 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 B3GNT6Q6ZMB0 384 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 P4HA3Q7Z4N8 544 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 ZAR1Q86SH2 424 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 UBQLNLQ8IYU4 475 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 OR2M3Q8NG83 312 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 OR4C3Q8NH37 302 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 B4GALNT2Q8NHY0 566 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 CA5BP1Q8WTZ4 195 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 RND1Q92730 232 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 HOXB13Q92826 284 aaPredicted RBP8.17□□□□□ -1.1
SPG11-207ENST00000558138 SDCCAG3Q96C92 435 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 TRIB1Q96RU8 372 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 VKORC1Q9BQB6 163 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 PIGQQ9BRB3 760 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 FAM107BQ9H098 131 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 NSRP1Q9H0G5 558 aaKnown RBP8.17□□□□□ -1.1
SPG11-207ENST00000558138 UBQLN3Q9H347 655 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 PLSCR2Q9NRY7 297 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 FBXO34Q9NWN3 711 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 STOML1Q9UBI4 398 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 P2RX2Q9UBL9 471 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 MKLN1Q9UL63 735 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 WDR45Q9Y484 360 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 HELZ2Q9BYK8 2649 aaKnown RBP8.17□□□□□ -1.1
SPG11-207ENST00000558138 BAHCC1Q9P281 2608 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 NCKAP5O14513 1909 aa8.17□□□□□ -1.1
SPG11-207ENST00000558138 NUP214P35658 2090 aaPredicted RBP8.17□□□□□ -1.1
SPG11-207ENST00000558138 FAM90A27PA6NNH2 459 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 C5orf58C9J3I9 102 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 PRSS44E7EML9 344 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 SEC14L5O43304 696 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 SCN2BO60939 215 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 TNFRSF21O75509 655 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 ACTL6AO96019 429 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 RNF224P0DH78 156 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 UBL4AP11441 157 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 ENDOUP21128 410 aaKnown RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 ME2P23368 584 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 MSX1P28360 303 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 MDH1P40925 334 aaKnown RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 MAP3K8P41279 467 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 ATP12AP54707 1039 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 GAS1P54826 345 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 DSTNP60981 165 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 TXNL4AP83876 142 aaKnown RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 CRYZQ08257 329 aaKnown RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 GNA13Q14344 377 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 ARHGAP11BQ3KRB8 267 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 MMEL1Q495T6 779 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 GTDC1Q4AE62 458 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
SPG11-207ENST00000558138 PDZK1Q5T2W1 519 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 OLIG3Q7RTU3 272 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 MTERF4Q7Z6M4 381 aaKnown RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 HMGN2P46Q86SG4 172 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 ZNF808Q8N4W9 903 aaPredicted RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 MEIOBQ8N635 442 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 OR5M1Q8NGP8 315 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 GOT1L1Q8NHS2 421 aaPredicted RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 FAM110BQ8TC76 370 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 ROPN1LQ96C74 230 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 C1GALT1C1Q96EU7 318 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 SDF2Q99470 211 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 UGT2B28Q9BY64 529 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 OR2B2Q9GZK3 357 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 SERHL2Q9H4I8 314 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 TPT1P8Q9HAU6 139 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 MRGBPQ9NV56 204 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 LEF1Q9UJU2 399 aaPredicted RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 CARD8Q9Y2G2 431 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 DTNAQ9Y4J8 743 aa8.16□□□□□ -1.1
SPG11-207ENST00000558138 UBR5O95071 2799 aaPredicted RBP8.16□□□□□ -1.1
SPG11-207ENST00000558138 ZNF407Q9C0G0 2248 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 GTF3C1Q12789 2109 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 TENM4Q6N022 2769 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 A0A1W2PQD3 144 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 EVPLLA8MZ36 301 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 AHRRA9YTQ3 701 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 CLIC1O00299 241 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 DYNC1I1O14576 645 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 ZNF264O43296 627 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 H6PDO95479 791 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 CSTAP01040 98 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 BCHEP06276 602 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 NGFRP08138 427 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 HOXD4P09016 255 aaPredicted RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 ETFAP13804 333 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 PTGER4P35408 488 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 STARP49675 285 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 NUP107P57740 925 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 EEFSECP57772 596 aaKnown RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 CBFBQ13951 182 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 NFYCQ13952 458 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 CD226Q15762 336 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 SGCBQ16585 318 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 NDUFAF6Q330K2 333 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 COX20Q5RI15 118 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 XKRXQ6PP77 449 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 BLOC1S3Q6QNY0 202 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms