RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PRKAA1Q13131 559 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 RPA4Q13156 261 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 KIR2DS3Q14952 304 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 ZNF699Q32M78 642 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 KRTAP27-1Q3LI81 207 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 NDUFAF5Q5TEU4 345 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 ALS2CLQ60I27 953 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 FBXL22Q6P050 247 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 PACS1Q6VY07 963 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 FAM92BQ6ZTR7 304 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 SIX6OS1Q8N1H7 587 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 ZNF540Q8NDQ6 660 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 OR2Y1Q8NGV0 311 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 SMPDL3BQ92485 455 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 ZNF582Q96NG8 517 aaPredicted RBP5.07□□□□□ -1.6
RTF1-204ENST00000558117 SIGLEC12Q96PQ1 595 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 PAFAH2Q99487 392 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 SPXQ9BT56 116 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 C1orf21Q9H246 121 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 OSGEPL1Q9H4B0 414 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 LIN28AQ9H9Z2 209 aaKnown RBP5.07□□□□□ -1.6
RTF1-204ENST00000558117 UCK1Q9HA47 277 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 TAS2R14Q9NYV8 317 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 EPHA6Q9UF33 1036 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 SLC17A4Q9Y2C5 497 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 RRP15Q9Y3B9 282 aaKnown RBP5.07□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD36A6QL64 1941 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 LOC100509620A0A075B734 347 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 LOC102723996A0A087X1L8 192 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 A0A0D9SEW6 157 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 C15orf62A8K5M9 175 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 C9J4A7 227 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 NDUFS4O43181 175 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 ZMPSTE24O75844 475 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 CD160O95971 181 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 F10P00742 488 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 STATHP02808 62 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 IVLP07476 585 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 DLATP10515 647 aaKnown RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 PAX1P15863 534 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 TNNI1P19237 187 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 MSH3P20585 1137 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 SERPINH1P50454 418 aaKnown RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 CSE1LP55060 971 aaKnown RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 NUP107P57740 925 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 DAOAP59103 153 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 PPP1CAP62136 330 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 UBE2IP63279 158 aaKnown RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 INCA1Q0VD86 236 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 ORC2Q13416 577 aaPredicted RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 PTK6Q13882 451 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 IL17AQ16552 155 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 MRGPRG-AS1Q2M3A8 158 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 ZNF789Q5FWF6 425 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 WDR38Q5JTN6 314 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 C6orf52Q5T4I8 152 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 ADAM5Q6NVV9 412 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 PNCKQ6P2M8 343 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 MSANTD1Q6ZTZ1 278 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 GPBP1Q86WP2 473 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 KLHDC8BQ8IXV7 354 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 DCAF4L2Q8NA75 395 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 OR10V1Q8NGI7 309 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 DQX1Q8TE96 717 aaKnown RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 PSMF1Q92530 271 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 CORO2AQ92828 525 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 PTERQ96BW5 349 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 RBMXL1Q96E39 390 aaKnown RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 BTN2A3PQ96KV6 586 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 C16orf45Q96MC5 204 aaPredicted RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 PLIN2Q99541 437 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 REG4Q9BYZ8 158 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 TM6SF2Q9BZW4 377 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 DENND2DQ9H6A0 471 aaPredicted RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 PELI2Q9HAT8 420 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 NOCTQ9UK39 431 aaKnown RBP5.06□□□□□ -1.6
RTF1-204ENST00000558117 GAB2Q9UQC2 676 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 JRKLQ9Y4A0 524 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 NUP210LQ5VU65 1888 aa5.06□□□□□ -1.6
RTF1-204ENST00000558117 PGRMC2O15173 223 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CLDN11O75508 207 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 AMBPP02760 352 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 INHBAP08476 426 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CFC1BP0CG36 223 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CFC1P0CG37 223 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ERCC2P18074 760 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CBLP22681 906 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 MC5RP33032 325 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CASP3P42574 277 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 CAPZBP47756 277 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ARSEP51690 589 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ELP6Q0PNE2 266 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ADIGQ0VDE8 80 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 GAGE2BQ13066 116 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 ANKDD1AQ495B1 522 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 GAGE2EQ4V326 116 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 FAM98BQ52LJ0 330 aaKnown RBP5.05□□□□□ -1.6
RTF1-204ENST00000558117 RABGAP1LQ5R372 815 aa5.05□□□□□ -1.6
RTF1-204ENST00000558117 MLIPQ5VWP3 458 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms